Use guix-channel-job-gexp for genenetwork3 pylint and mypy CI jobs.

* genenetwork-development.scm (genenetwork3-mypy,
genenetwork3-pylint): Delete variables.
(genenetwork-projects): Build only genenetwork3 variable in
genenetwork3 CI job. Combine genenetwork3-mypy and genenetwork3-pylint
CI jobs into a genenetwork3-all-tests job that uses
guix-channel-job-gexp.
* genenetwork/development-helper.scm (genenetwork3-lint-gexp): Delete
function.

1 files changed, 1 insertions, 38 deletions

diff --git a/genenetwork/development-helper.scm b/genenetwork/development-helper.scm
index 627a80a..4e8c62b 100644
--- a/genenetwork/development-helper.scm
+++ b/genenetwork/development-helper.scm
@@ -1,5 +1,5 @@
 ;;; genenetwork-machines --- Guix configuration for genenetwork machines
-;;; Copyright © 2022 Arun Isaac <arunisaac@systemreboot.net>
+;;; Copyright © 2022, 2023 Arun Isaac <arunisaac@systemreboot.net>
 ;;; Copyright © 2022 Frederick Muriuki Muriithi <fredmanglis@gmail.com>
 ;;;
 ;;; This file is part of genenetwork-machines.
@@ -65,43 +65,6 @@ items."
             (test-system #$system '#$asd-files #f))
           (mkdir-p #$output)))))
 
-(define (genenetwork3-lint-gexp genenetwork3-source profile)
-  "Return a G-expression that runs GeneNetwork3 lint tests in PROFILE
-with GENENETWORK3-SOURCE as the current directory. GENENETWORK3-SOURCE
-is a checkout of the genenetwork3 source code. PROFILE is a profile
-with genenetwork3 dependencies."
-  (with-imported-modules '((guix build utils))
-    (with-profile profile
-      #~(begin
-          (use-modules (rnrs exceptions)
-                       (srfi srfi-26)
-                       (ice-9 rdelim)
-                       (guix build utils))
-
-          (define (shell-script? filename stat-obj)
-            (and (eq? (stat:type stat-obj) 'regular)
-                 (call-with-input-file filename
-                   (lambda (port)
-                     (let ((first-line (read-line port)))
-                       (and (not (eof-object? first-line))
-                            (> (string-length first-line) 2)
-                            (string=? (string-take first-line 2) "#!")
-                            (or (string-contains first-line "/bin/sh")
-                                (string-contains first-line "/bin/bash"))))))))
-          
-          (chdir #$genenetwork3-source)
-          (guard (condition ((invoke-error? condition)
-                             (format (current-error-port)
-                                     "`~a~{ ~a~}' failed with exit status ~a~%"
-                                     (invoke-error-program condition)
-                                     (invoke-error-arguments condition)
-                                     (invoke-error-exit-status condition))
-                             (exit #f)))
-            (for-each (cut invoke "shellcheck" <>)
-                      (find-files "." shell-script?))
-            (invoke "pylint" "main.py" "setup.py" "wsgi.py" "setup_commands" "tests" "gn3" "scripts" "sheepdog"))
-          (mkdir-p #$output)))))
-
 (define (genenetwork-lint-gexp source-repo-checkout profile files-and-modules)
   "Return a G-expression that runs GeneNetwork3 lint tests in PROFILE
 with SOURCE-REPO-CHECKOUT as the current directory. SOURCE-REPO-CHECKOUT