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-rw-r--r--gn_libs/jobs/jobs.py136
1 files changed, 136 insertions, 0 deletions
diff --git a/gn_libs/jobs/jobs.py b/gn_libs/jobs/jobs.py
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+++ b/gn_libs/jobs/jobs.py
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+"""Handle asynchronous/background jobs. Job data is stored in SQLite database(s)."""
+import os
+import sys
+import uuid
+import shlex
+import logging
+import subprocess
+from pathlib import Path
+from functools import reduce
+from typing import Union, Optional
+from datetime import datetime, timezone, timedelta
+
+from gn_libs.sqlite3 import DbCursor, DbConnection, cursor as _cursor
+
+_logger_ = logging.getLogger(__name__)
+_DEFAULT_EXPIRY_SECONDS_ = 2 * 24 * 60 * 60 # 2 days, in seconds
+
+
+class JobNotFound(Exception):
+ """Raised if we try to retrieve a non-existent job."""
+
+
+def __job_metadata__(cursor: DbCursor, job_id: Union[str, uuid.UUID]) -> dict:
+ """Fetch extra job metadata."""
+ cursor.execute("SELECT * FROM jobs_metadata WHERE job_id=?", (str(job_id),))
+ return {
+ row["metadata_key"]: row["metadata_value"]
+ for row in cursor.fetchall()
+ }
+
+
+def job(conn: DbConnection, job_id: Union[str, uuid.UUID], fulldetails: bool = False) -> dict:
+ """Fetch the job details for a job with a particular ID"""
+ with _cursor(conn) as cursor:
+ cursor.execute("SELECT * FROM jobs WHERE job_id=?", (str(job_id),))
+ _job = dict(cursor.fetchone())
+ if not bool(_job):
+ raise JobNotFound(f"Could not find job with ID {job_id}")
+
+ _job["metadata"] = __job_metadata__(cursor, job_id)
+
+ if fulldetails:
+ _job["stderr"] = job_stderr(conn, job_id)
+ _job["stdout"] = job_stdout(conn, job_id)
+
+ return _job
+
+
+def __save_job__(conn: DbConnection, the_job: dict, expiry_seconds: int) -> dict:
+ """Save the job to database."""
+
+ with _cursor(conn) as cursor:
+ job_id = str(the_job["job_id"])
+ expires = ((the_job["created"] + timedelta(seconds=expiry_seconds))
+ if expiry_seconds > 0 else None)
+ cursor.execute("INSERT INTO jobs(job_id, created, expires, command) "
+ "VALUES(:job_id, :created, :expires, :command)",
+ {
+ "job_id": job_id,
+ "created": the_job["created"].isoformat(),
+ "expires": (expires and expires.isoformat()),
+ "command": the_job["command"]
+ })
+ metadata = tuple({"job_id": job_id, "key": key, "value": value}
+ for key,value in the_job["metadata"].items())
+ if len(metadata) > 0:
+ cursor.executemany(
+ "INSERT INTO jobs_metadata(job_id, metadata_key, metadata_value) "
+ "VALUES (:job_id, :key, :value)",
+ metadata)
+
+ return the_job
+
+
+def initialise_job(
+ conn: DbConnection,
+ job_id: uuid.UUID,
+ command: list,
+ job_type: str,
+ extra_meta: dict = {},
+ expiry_seconds: Optional[int] = _DEFAULT_EXPIRY_SECONDS_
+) -> dict:
+ """Initialise the job and put the details in a SQLite3 database."""
+
+ _job = {
+ "job_id": job_id,
+ "command": shlex.join(command),
+ "created": datetime.now(timezone.utc),
+ "metadata": {
+ "status": "pending",
+ "percent": 0,
+ "job-type": job_type,
+ **extra_meta
+ }
+ }
+ return __save_job__(conn, _job, expiry_seconds)
+
+
+def error_filename(jobid, error_dir):
+ "Compute the path of the file where errors will be dumped."
+ return f"{error_dir}/job_{jobid}.error"
+
+
+def launch_job(
+ the_job: dict,
+ sqlite3_url: str,
+ error_dir: Path,
+ worker_manager: str = "scripts.worker"
+) -> dict:
+ """Launch a job in the background"""
+ if not os.path.exists(error_dir):
+ os.mkdir(error_dir)
+
+ job_id = str(the_job["job_id"])
+ with open(error_filename(job_id, error_dir),
+ "w",
+ encoding="utf-8") as errorfile:
+ subprocess.Popen( # pylint: disable=[consider-using-with]
+ [sys.executable, "-m", worker_manager, sqlite3_url, job_id],
+ stderr=errorfile,
+ env={"PYTHONPATH": ":".join(sys.path)})
+
+ return the_job
+
+
+def update_metadata(conn: DbConnection, job_id: Union[str, uuid.UUID], key: str, value: str):
+ """Update the value of a metadata item."""
+ with _cursor(conn) as cursor:
+ cursor.execute(
+ "UPDATE jobs_metadata SET metadata_value=:value "
+ "WHERE job_id=:job_id AND metadata_key=:key",
+ {
+ "job_id": str(job_id),
+ "key": key,
+ "value": value
+ })