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| author | Pjotr Prins | 2024-01-06 18:23:27 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2024-01-06 18:23:27 +0100 |
| commit | 1c46296016ead8a5fa17ff291eeabbd0a0c63e4b (patch) | |
| tree | 2ea04dab40e91eef942fc2d6abec5530f1112ed6 /scripts/precompute/precompute-hits.scm | |
| parent | 902cf907e9b315f52b2ef3b4b791e492a87e6437 (diff) | |
| download | gn-guile-1c46296016ead8a5fa17ff291eeabbd0a0c63e4b.tar.gz | |
Tracking metadat for GN DB
Diffstat (limited to 'scripts/precompute/precompute-hits.scm')
| -rwxr-xr-x | scripts/precompute/precompute-hits.scm | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/scripts/precompute/precompute-hits.scm b/scripts/precompute/precompute-hits.scm index f33e7e9..8f27bbe 100755 --- a/scripts/precompute/precompute-hits.scm +++ b/scripts/precompute/precompute-hits.scm @@ -99,12 +99,12 @@ ssh -L 3306:127.0.0.1:3306 -f -N tux02.genenetwork.org ((id . value) (cons (assoc-ref bxd-strains id) value) ))) id_traits)) - (display traits) + ;; (display traits) ;; (if (= 0 (length non-bxd)) (if (eq? non-bxd '()) (begin (set-precompute-hit-status! db data-id-str "GEMMA-START") - (run-gemma "BXD" data-id name trait-name traits) + (run-gemma "BXD" data-id probeset-id probesetfreeze-id name trait-name traits) (set-precompute-hit-status! db data-id-str "GEMMA-DONE")) ;; disable precompute if non-bxd, for now, so it won't try again (set-precompute-hit-status! db data-id-str "NON-BXD")) |