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| author | Pjotr Prins | 2023-11-10 11:13:01 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2023-11-10 11:13:01 +0100 |
| commit | 0e29ab17e14d1d58905ae708ac48acb0e47cbd86 (patch) | |
| tree | e695518a49b1ea087376ce341a2d903de94c142d | |
| parent | 4b5ec2a5709404feb51ccc3900c0770ba81929bf (diff) | |
| download | gn-guile-0e29ab17e14d1d58905ae708ac48acb0e47cbd86.tar.gz | |
Preparing for precompute runner
| -rw-r--r-- | README.md | 6 | ||||
| -rw-r--r-- | scripts/README.md | 4 | ||||
| -rw-r--r-- | scripts/precompute/.guix-shell | 10 | ||||
| -rw-r--r-- | scripts/precompute/README.md | 3 |
4 files changed, 22 insertions, 1 deletions
@@ -14,7 +14,7 @@ The current repository lives at git clone tux02.genenetwork.org:/home/git/genenetwork/gn-guile ``` -GNU Guile allows you to develop against a live running web server using emacs-geiser. To try this fire up the web server as +GNU Guile allows you to develop against a live running web server using emacs-geiser. To try this fire up the web server from the `web` directory as ```sh cd web @@ -25,6 +25,10 @@ Note the leading dot. The .guix-shell is defined in `genenetwork3/gn3-guile/web` Next fire up emacs with `emacs-geiser-guile` and connect to the running web server with `M-x geiser-connect` and the port `1970`. Now you can not only inspect procedures, but also update any prodedure on the live server using `C-M-x` and get updated output from the webserver! +# Tools + +Some tooling and scripts that run independently are stored in `./scripts`. + # Development ``` diff --git a/scripts/README.md b/scripts/README.md new file mode 100644 index 0000000..10ec38c --- /dev/null +++ b/scripts/README.md @@ -0,0 +1,4 @@ +# Tooling and scripts + +In this directory we store scripts that run independently of the web +service. diff --git a/scripts/precompute/.guix-shell b/scripts/precompute/.guix-shell new file mode 100644 index 0000000..08c74f9 --- /dev/null +++ b/scripts/precompute/.guix-shell @@ -0,0 +1,10 @@ +#!/bin/bash +# +# run with options '-- ./webserver.scm 8091' e.g. +# . .guix-shell -- guile -L .. --fresh-auto-compile --listen=1970 -e main ./webserver.scm 8091 + +echo "Create a shell to run tools. In the container" +echo "mkdir /usr/bin -p" +echo "ln -s \$GUIX_ENVIRONMENT/bin/env /usr/bin/env" + +guix shell -C -F --network coreutils guile guile-dbi guile-dbd-mysql guile-fibers guile-json guile-gnutls guile-readline guile-redis openssl nss-certs $* diff --git a/scripts/precompute/README.md b/scripts/precompute/README.md new file mode 100644 index 0000000..53f846e --- /dev/null +++ b/scripts/precompute/README.md @@ -0,0 +1,3 @@ +# Precompute + +Some work on precompute is documented [here](https://issues.genenetwork.org/topics/systems/mariadb/precompute-mapping-input-data). This is WIP. |