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-rw-r--r--BXD102xBXD077F1-error.gmi799logplainabout
d---------CI-CD161logplain
-rw-r--r--DOL-mapping.gmi815logplainabout
-rw-r--r--README.gmi3511logplainabout
-rw-r--r--TempDataSet-object-has-no-attribute.gmi2248logplainabout
-rw-r--r--add-bulklmm-feature.gmi2505logplainabout
-rw-r--r--add-collection-import.gmi367logplainabout
-rw-r--r--add-documentation-and-data-retrieval-for-AI-repo.gmi394logplainabout
-rw-r--r--add-edit-issue-link-in-tissue.gmi608logplainabout
-rw-r--r--add-generif-page.gmi782logplainabout
-rw-r--r--add-genotype-files-to-rdf.gmi405logplainabout
-rw-r--r--add-homology-track.gmi1296logplainabout
-rw-r--r--add-logging-to-rdf-endpoints.gmi542logplainabout
-rw-r--r--add-mapping-link.gmi542logplainabout
-rw-r--r--add-metadata-to-traits-page.gmi4284logplainabout
-rw-r--r--add-mouse-data-from-klaus.gmi3158logplainabout
-rw-r--r--add-pluto-notebooks.gmi572logplainabout
-rw-r--r--add-sample-size-to-rdf.gmi182logplainabout
-rw-r--r--add-search-select-export-to-datatables-table.gmi1063logplainabout
-rw-r--r--add-search-syntax-hints.gmi694logplainabout
-rw-r--r--add-share-datasets-htmx-page.gmi1201logplainabout
-rw-r--r--add-target-column-in-pcorrs-table.gmi992logplainabout
-rw-r--r--add-to-collection-error.gmi2851logplainabout
-rw-r--r--add-unique-identifiers-for-case-attributes.gmi158logplainabout
-rw-r--r--adding-principle-component-to-collection-error.gmi1803logplainabout
-rw-r--r--adding-traits-from-mapping.gmi243logplainabout
-rw-r--r--annotation.gmi1601logplainabout
-rw-r--r--assorted-ui-issues.gmi1069logplainabout
d---------auth103logplain
d---------authentication_authorisation636logplain
-rw-r--r--authorisation.gmi4802logplainabout
-rw-r--r--autogenerate-documuntation-for-rdf.gmi1889logplainabout
-rw-r--r--automated-testing.gmi5465logplainabout
-rw-r--r--automatically-find-broken-links-on-gn2.gmi1985logplainabout
d---------binderlite952logplain
-rw-r--r--broken-build-xapian.gmi320logplainabout
-rw-r--r--broken-cd.gmi1125logplainabout
-rw-r--r--bugfix_coupling_current_app_and_db_utils.gmi2351logplainabout
-rw-r--r--buggy-use-of-urljoin.gmi1707logplainabout
-rw-r--r--cant-use-guix-bioinformatics-with-guix-pull.gmi393logplainabout
-rw-r--r--capture-data-on-BXDs-in-RDF.gmi2714logplainabout
-rw-r--r--capture-phenotype-state-in-a-hash.gmi963logplainabout
-rw-r--r--case-attr-edit-error.gmi2555logplainabout
-rw-r--r--cd-gn3-configurations.gmi730logplainabout
-rw-r--r--cleanup-base-file-gn2.gmi925logplainabout
-rw-r--r--collections_count_bug.gmi524logplainabout
-rw-r--r--consecutive-crud-applications-when-uploading-data.gmi722logplainabout
-rw-r--r--cool-interfaces-we-should-emulate.gmi1633logplainabout
-rw-r--r--correlation-error.gmi781logplainabout
-rw-r--r--correlation-missing-file.gmi1339logplainabout
-rw-r--r--correlation-timing-out.gmi496logplainabout
-rw-r--r--correlation_speed_issue.gmi3719logplainabout
-rw-r--r--correlation_wrong_results.gmi2455logplainabout
-rw-r--r--correlations-all-samples.gmi944logplainabout
-rw-r--r--correlations-fewer-result-than-expected.gmi244logplainabout
-rw-r--r--correlations-return-fewer-results.gmi2842logplainabout
-rw-r--r--correlations-script-to-build-text-files.gmi1720logplainabout
-rw-r--r--correlations-time-out.gmi2350logplainabout
-rw-r--r--create-custom-rif-xapian-index.gmi329logplainabout
-rw-r--r--create-rdf-traits-page.gmi695logplainabout
-rw-r--r--create-ui-language-for-gn2.gmi387logplainabout
-rw-r--r--csv-error-ITP_10001-longevity-data-set.gmi1973logplainabout
-rw-r--r--csv-metadata-not-commented-out.gmi1196logplainabout
-rw-r--r--custom_data_for_scatterplot.gmi721logplainabout
-rw-r--r--data-upload.gmi621logplainabout
d---------data42logplain
d---------data_upload_gn60logplain
-rw-r--r--database-ProbeSetSE-schema-bug.gmi2603logplainabout
-rw-r--r--database-defects.gmi1973logplainabout
-rw-r--r--database-long-query-after-innodb-migration.gmi5063logplainabout
-rw-r--r--database-migrations.gmi513logplainabout
-rw-r--r--database-not-responding.gmi18862logplainabout
-rw-r--r--dataset_queried_twice.gmi657logplainabout
-rw-r--r--decouple-tasks-in-results-display.gmi1552logplainabout
-rw-r--r--default-search-query-in-search-field.gmi474logplainabout
-rw-r--r--demo-generif-data-in-sparql.gmi297logplainabout
-rw-r--r--deploy.gmi1106logplainabout
d---------design46logplain
-rw-r--r--do-bulk-query-for-correlation-results-display.gmi726logplainabout
-rw-r--r--do-not-conflict-with-random.gmi783logplainabout
-rw-r--r--document-all-virtuoso-instances.gmi293logplainabout
-rw-r--r--document-xapian-search-code-architecture.gmi279logplainabout
-rw-r--r--dump-genewiki-data-in-rdf.gmi582logplainabout
-rw-r--r--dump-genewiki-metadata.gmi2262logplainabout
-rw-r--r--dump-sample-data-to-lmdb.gmi3003logplainabout
-rw-r--r--edit-metadata-bugs.gmi5257logplainabout
-rw-r--r--edit-rif-metadata.gmi4534logplainabout
-rw-r--r--editing-bug-brittle-fix-for-editing-metadata.gmi2038logplainabout
-rw-r--r--editing-bug-conflating-dataset_id-with-inbred_set_id.gmi1921logplainabout
-rw-r--r--editing-dataset-metadata.gmi800logplainabout
-rw-r--r--editing-delete-rejected-diffs-from-db.gmi246logplainabout
-rw-r--r--editing-show-edit-button-for-all.gmi668logplainabout
-rw-r--r--editing-show-last-edited.gmi408logplainabout
-rw-r--r--effect-size-for-gemma-is-a-must.gmi720logplainabout
-rw-r--r--enable-intergroup-analysis.gmi1138logplainabout
-rw-r--r--enter-key-in-global-search-field.gmi754logplainabout
-rw-r--r--error-handling-external-errors.gmi1442logplainabout
-rw-r--r--error-when-fetching-snps.gmi3131logplainabout
-rw-r--r--error-zooming-chromosome.gmi1810logplainabout
-rw-r--r--export-uploaded-data-to-RDF-store.gmi3735logplainabout
-rw-r--r--failing-menu-in-cd.gmi402logplainabout
-rw-r--r--failing-tests-on-gn2-20220803.gmi1126logplainabout
d---------features46logplain
-rw-r--r--fetch-sample-data.gmi2915logplainabout
-rw-r--r--fetch-trait-names-for-phenotypes.gmi1180logplainabout
-rw-r--r--fetch_trait_data_using_genofiles.gmi7695logplainabout
-rw-r--r--fix-broken-builds-in-gn2-and-gn3.gmi3722logplainabout
-rw-r--r--fix-broken-utf8-chars.gmi1378logplainabout
-rw-r--r--fix-case-attribute-editing.gmi1180logplainabout
-rw-r--r--fix-case-attribute-work.gmi908logplainabout
-rw-r--r--fix-collection-export.gmi1041logplainabout
-rw-r--r--fix-correlation-table.gmi758logplainabout
-rw-r--r--fix-failing-MR-tests.gmi785logplainabout
-rw-r--r--fix-failing-gn2-tests.gmi404logplainabout
-rw-r--r--fix-genotype-filename-HSNIH-Palmer.gmi742logplainabout
-rw-r--r--fix-gn2-generic-error-codes.gmi470logplainabout
-rw-r--r--fix-gn3-python-3.10-linting-errors.gmi6579logplainabout
-rw-r--r--fix-haplotype-name-overflow.gmi398logplainabout
-rw-r--r--fix-include-f1-parents-correlations.gmi317logplainabout
-rw-r--r--fix-load-rdf-script.gmi1281logplainabout
-rw-r--r--fix-missing-genotype-files-for-gemma.gmi697logplainabout
-rw-r--r--fix-scree-plot.gmi646logplainabout
-rw-r--r--fix-spam-entries-in-gn-auth-production.gmi996logplainabout
-rw-r--r--full-text-search.gmi1307logplainabout
d---------gemma518logplain
-rw-r--r--genecup-running-as-root.gmi1947logplainabout
d---------genenetwork1115logplain
d---------genenetwork1499logplain
-rw-r--r--genenetwork2-account-registration-error.gmi4907logplainabout
-rw-r--r--genenetwork2-cd-sometimes-fails-to-restart.gmi1070logplainabout
d---------genenetwork2279logplain
d---------genenetwork3163logplain
-rw-r--r--generalize-tables.gmi1208logplainabout
-rw-r--r--geno-correlation-bug.gmi866logplainabout
-rw-r--r--genotype-html-page.gmi384logplainabout
-rw-r--r--genotype-metadata.gmi349logplainabout
-rw-r--r--genotype_search_bug.gmi236logplainabout
-rw-r--r--global-search-connection-slow.gmi774logplainabout
-rw-r--r--global-search-unhandled-error.gmi746logplainabout
-rw-r--r--global_search_phenotypes.gmi398logplainabout
d---------gn-auth828logplain
d---------gn-uploader942logplain
-rw-r--r--gn-volt-genofiles-parsing-integration.gmi765logplainabout
-rw-r--r--gn1-annotation-page-is-broken.gmi439logplainabout
-rw-r--r--gn3-nginx-timeout.gmi975logplainabout
-rw-r--r--gn3-technical-debt.gmi429logplainabout
d---------gnbug328logplain
d---------gnqa755logplain
-rw-r--r--gnsoc-ci-rethink.gmi3019logplainabout
-rw-r--r--guixify-llm-system.gmi139logplainabout
-rw-r--r--handle-too-many-password-attempts.gmi323logplainabout
-rw-r--r--handling-resource-links-in-probeset-page.gmi2544logplainabout
-rw-r--r--htmx-error-handling.gmi3514logplainabout
-rw-r--r--implement-gn-markdown-editor-in-guile.gmi824logplainabout
-rw-r--r--implement-gn-markdown-editor.gmi734logplainabout
-rw-r--r--implement-parallel-correlation-with-rust.gmi2363logplainabout
-rw-r--r--implement_xapian_to_text_transformer.gmi511logplainabout
-rw-r--r--import_collections_popup_bug.gmi1813logplainabout
-rw-r--r--improve-menu-generation-and-move-it-to-gn3.gmi1850logplainabout
-rw-r--r--improve-presentation-of-search-results.gmi915logplainabout
-rw-r--r--improve-sparql-results.gmi1027logplainabout
-rw-r--r--incorrect-pmids.gmi1047logplainabout
-rw-r--r--inspect-discrepancies-between-xapian-and-sql-search.gmi6302logplainabout
-rw-r--r--inspect-discrepancies-between-xapian-and-sql-search2.gmi370logplainabout
-rw-r--r--integrate-feed-analyser.gmi595logplainabout
-rw-r--r--integrate-markdown-editor-to-gn2.gmi4097logplainabout
-rw-r--r--invalid-token-error.gmi3660logplainabout
-rw-r--r--linking_genotype-files-to-datasets.gmi3446logplainabout
-rw-r--r--logging_handler_improvements_gn3.gmi1770logplainabout
-rw-r--r--make-partial-correlation-tables-searchable.gmi875logplainabout
-rw-r--r--make-xapian-index-rebuild-conditional-on-database-checksums.gmi879logplainabout
-rw-r--r--mapping-haley-knott-regression-chromosome-zoom-in-bug.gmi631logplainabout
-rw-r--r--mapping-horizontal-scroll.gmi335logplainabout
-rw-r--r--mapping-zoom-bug.gmi1005logplainabout
-rw-r--r--materialised-views-for-correlations.gmi3955logplainabout
-rw-r--r--metadata-caching-bug.gmi2816logplainabout
-rw-r--r--metadata-edits-improvements.gmi5936logplainabout
d---------mgamma220logplain
-rw-r--r--minor-phenotype-page-ui-updates.gmi1120logplainabout
-rw-r--r--misc-ui-fixes.gmi1608logplainabout
-rw-r--r--missing-ci-cd-definitions-for-service-daemons.gmi1290logplainabout
-rw-r--r--missing-python-modules-for-gn3.gmi329logplainabout
-rw-r--r--model-gn-menu-in-rdf.gmi362logplainabout
-rw-r--r--modelling-phenotype-data.gmi7224logplainabout
-rw-r--r--move-data-endpoint-from-gn2-to-gn3.gmi1307logplainabout
-rw-r--r--move-dataset-metadata-to-git.gmi373logplainabout
-rw-r--r--move-racket-gn-rest-api-to-guile.gmi941logplainabout
-rw-r--r--move-search-to-xapian.gmi1070logplainabout
-rw-r--r--multi-trait-heatmap-failed.gmi802logplainabout
-rw-r--r--non-deterministic-gn3-setup-on-tux01.gmi2155logplainabout
-rw-r--r--notify-user-after-trait-edit.gmi1047logplainabout
-rw-r--r--old_session_bug.gmi758logplainabout
-rw-r--r--order-entries-in-csv-dump.gmi284logplainabout
-rw-r--r--parsing_genotype_files.gmi413logplainabout
-rw-r--r--pca-changes.gmi597logplainabout
-rw-r--r--per-service-profile-for-shepherd-services.gmi1974logplainabout
-rw-r--r--phenotype-correlation-error.gmi10055logplainabout
-rw-r--r--pre-cache-datasets.gmi917logplainabout
-rw-r--r--prevent-weak-passwords.gmi555logplainabout
-rw-r--r--probeset-html-page.gmi1206logplainabout
-rw-r--r--probeset-metadata-upload.gmi1144logplainabout
-rw-r--r--provide-link-to-register-user-in-sign-in-page.gmi663logplainabout
-rw-r--r--public-inbox.gmi298logplainabout
d---------quality-control776logplain
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-rw-r--r--redesign-global-search-design.gmi664logplainabout
-rw-r--r--redirect-http-to-https.gmi710logplainabout
-rw-r--r--redis-data.gmi514logplainabout
-rw-r--r--remove-custom-bootstrap-css.gmi1046logplainabout
-rw-r--r--remove-elastic-search.gmi368logplainabout
-rw-r--r--remove-external-js-code.gmi1342logplainabout
-rw-r--r--remove-extraneous-pcorrs-options.gmi1329logplainabout
-rw-r--r--remove-references-to-old-gn-auth-code.gmi198logplainabout
-rw-r--r--remove_gn2_gn3_network_dependency.gmi462logplainabout
-rw-r--r--render-images-in-tissue-web-output.gmi384logplainabout
-rw-r--r--replace-neo4j-with-virtuoso.gmi179logplainabout
-rw-r--r--report-invalid-search-queries-over-api.gmi556logplainabout
-rw-r--r--reset-password-on-container-rebuild.gmi277logplainabout
-rw-r--r--review-auth-code.gmi257logplainabout
-rw-r--r--rework-settings.gmi1089logplainabout
-rw-r--r--rqtl-mapping-throws-JSONDecodeError.gmi4672logplainabout
-rw-r--r--run-correlations-in-external-process.gmi1424logplainabout
-rw-r--r--sample-data-caching-problem.gmi907logplainabout
-rw-r--r--sample-data-not-appearing-in-phenotype-editing-page.gmi756logplainabout
-rw-r--r--search-case-sensitive.gmi178logplainabout
-rw-r--r--search-for-brca.gmi810logplainabout
-rw-r--r--search-hyphen-issue.gmi278logplainabout
-rw-r--r--search-queries-with-quoted-author-names-dont-work.gmi434logplainabout
-rw-r--r--search-results-for-SNPs-look-weird.gmi908logplainabout
-rw-r--r--search-results-not-quite-as-expected.gmi2685logplainabout
-rw-r--r--search-results-presentation-designs.gmi451logplainabout
-rw-r--r--set-up-gn-guile-in-tux02.gmi303logplainabout
-rw-r--r--set-up-jwt-gn3.gmi1143logplainabout
-rw-r--r--set-up-virtuoso-on-production.gmi3713logplainabout
-rw-r--r--simplify_data_set_py_in_gn2.gmi1241logplainabout
-rw-r--r--slow-correlations.gmi5275logplainabout
-rw-r--r--slow-query.gmi3938logplainabout
-rw-r--r--slow-sql-query-for-xapian-indexing.gmi6947logplainabout
-rw-r--r--sorting-correlation-nan-vals.gmi498logplainabout
-rw-r--r--sql-too-many-connections.gmi976logplainabout
-rw-r--r--sqlalchemy.gmi2038logplainabout
-rw-r--r--strainid-wrong-for-bxd.gmi2261logplainabout
-rw-r--r--support-searching-using-snp-names.gmi688logplainabout
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-rw-r--r--temporary-traits-access-concerns.gmi1120logplainabout
-rw-r--r--tests-for-genodb.gmi524logplainabout
-rw-r--r--timeout-in-cd.gmi220logplainabout
-rw-r--r--trait-page-errors-on-cd.gmi414logplainabout
-rw-r--r--trait-page-mapping-bug.gmi1142logplainabout
-rw-r--r--traits-editing-failure.gmi400logplainabout
-rw-r--r--transform-genelist-to-rdf.gmi2355logplainabout
-rw-r--r--trouble-shoot-500-on-llm-website.gmi2310logplainabout
-rw-r--r--trouble-shoot-inconsistencies-for-gn-llm.gmi492logplainabout
-rw-r--r--unable-to-open-new-tabs-for-mapping-correlations-in-chrome.gmi429logplainabout
-rw-r--r--uninformative-error-when-batch-submitting-unknown-strains.gmi568logplainabout
-rw-r--r--unresponsive-rdf-in-cd.gmi2871logplainabout
-rw-r--r--upload-genewiki-rdf-to-cd.gmi954logplainabout
-rw-r--r--use-genodb-in-gn.gmi337logplainabout
-rw-r--r--variant-browser-using-mm9.gmi767logplainabout
-rw-r--r--xapian_bug.gmi465logplainabout
-rw-r--r--zero-repr-in-data-upload.gmi606logplainabout