blob: 51d773c7af6540cad8ad237761e440b082659113 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
|
# GN3 Setup on tux01 - Non-Deterministic Behavior
## Tags
* assigned: bonfacem, zachs
* priority: high
* type: ops, guix
* keywords: gn3
## Description:
Last week, during a pairing session, Zach and I attempted to set up GN3 on tux01 following the provided channels file:
```
(list (channel
(name 'gn-bioinformatics)
(url "https://git.genenetwork.org/guix-bioinformatics")
(branch "master")
(commit
"25cb9ad70155a08c088ff28bf54c06e12293105b"))
(channel
(name 'guix-forge)
(url "https://git.systemreboot.net/guix-forge/")
(branch "main")
(introduction
(make-channel-introduction
"0432e37b20dd678a02efee21adf0b9525a670310"
(openpgp-fingerprint
"7F73 0343 F2F0 9F3C 77BF 79D3 2E25 EE8B 6180 2BB3")))))
```
... and execution steps:
```
source /var/guix/profiles/per-user/aruni/current-guix/etc/profile
guix pull -C channels.scm -p ~/.guix-extra-profiles/genenetwork
. .guix-extra-profiles/genenetwork/etc/profile
guix install genenetwork3 genenetwork2 -p ~/.guix-extra-profiles/genenetwork
git clone https://github.com/genenetwork/genenetwork3.git
cd genenetwork3/
/export2/local/home/zas1024/gn3-zach/genenetwork3/run_dev.sh run --port=8090
```
Despite our efforts, attempting a CURL on GN3 using Zach's username consistently resulted in an empty response.
Even when Zach switched to my user (bonfacem) and repeated the steps with my ".guix-extra-profile", the CURL still produced an empty result. We tried various troubleshooting steps, such as running the commands in a shell with no specific environment set up and using su to switch to bonfacem from Zach's userspace, but the issue persists.
|
