1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
|
# AuthorisationError in gn uploader
## Tags
* assigned: fredm
* status: open
* priority: critical
* type: error
* key words: authorisation, permission
## Description
Trying to create population for Kilifish dataset in the gn-uploader webpage,
then encountered the following error:
```sh
Traceback (most recent call last):
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/flask/app.py", line 917, in full_dispatch_request
rv = self.dispatch_request()
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/flask/app.py", line 902, in dispatch_request
return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args) # type: ignore[no-any-return]
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/uploader/authorisation.py", line 23, in __is_session_valid__
return session.user_token().either(
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/pymonad/either.py", line 89, in either
return right_function(self.value)
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/uploader/authorisation.py", line 25, in <lambda>
lambda token: function(*args, **kwargs))
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/uploader/population/views.py", line 185, in create_population
).either(
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/pymonad/either.py", line 91, in either
return left_function(self.monoid[0])
File "/gnu/store/wxb6rqf7125sb6xqd4kng44zf9yzsm5p-profile/lib/python3.10/site-packages/uploader/monadic_requests.py", line 99, in __fail__
raise Exception(_data)
Exception: {'error': 'AuthorisationError', 'error-trace': 'Traceback (most recent call last):\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/flask/app.py", line 917, in full_dispatch_request\n rv = self.dispatch_request()\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/flask/app.py", line 902, in dispatch_request\n return self.ensure_sync(self.view_functions[rule.endpoint])(**view_args) # type: ignore[no-any-return]\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/authlib/integrations/flask_oauth2/resource_protector.py", line 110, in decorated\n return f(*args, **kwargs)\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/gn_auth/auth/authorisation/resources/inbredset/views.py", line 95, in create_population_resource\n ).then(\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/pymonad/monad.py", line 152, in then\n result = self.map(function)\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/pymonad/either.py", line 106, in map\n return self.__class__(function(self.value), (None, True))\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/gn_auth/auth/authorisation/resources/inbredset/views.py", line 98, in <lambda>\n "resource": create_resource(\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/gn_auth/auth/authorisation/resources/inbredset/models.py", line 25, in create_resource\n return _create_resource(cursor,\n File "/gnu/store/38iayxz7dgm86f2x76kfaa6gwicnnjg4-profile/lib/python3.10/site-packages/gn_auth/auth/authorisation/checks.py", line 56, in __authoriser__\n raise AuthorisationError(error_description)\ngn_auth.auth.errors.AuthorisationError: Insufficient privileges to create a resource\n', 'error_description': 'Insufficient privileges to create a resource'}
```
The error above resulted from the attempt to upload the following information on the gn-uploader-`create population section`
Input details are as follows:
Full Name: Kilifish F2 Intercross Lines
Name: KF2_Lines
Population code: KF2
Description: Kilifish second generation population
Family: Crosses, AIL, HS
Mapping Methods: GEMMA, QTLReaper, R/qtl
Genetic type: intercross
And when pressed the `Create Population` icon, it led to the error above.
|