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# GN1 metadata
If we edit metadata on GN1 it shows a missing PHP.
The problem can be replitated by logging into GN1 and selecting a dataset. Hit the info button and 'edit' next.
## Tags
* assigned: pjotrp
* priority: high
* status: overdue
* type: bug
* keywords: GN1, genenetwork1, annotation
## Tasks
* [ ] Update guix, guix-bioinformatics for gn1
* [ ] Fix PHP view in Guix
* [ ] Fix CKEDITOR in Guix
## Description
Turns out that it is a PHP page that is not working. Also CKEDITOR is not visible.
## Info
On lily the file
=> /gnshare/gn/web/infoshare/manager/investigator.html
is written in PHP(!)
lily has a configuration setting:
* AddType application/x-httpd-php .htm .html
With running PHP 5.5 or 5.6 versions and i added this code to the .htaccess file. Remember both AddHandler and AddType must be present
```
AddHandler application/x-httpd-ea-php56 .htm .html .shtml
AddType application/x-httpd-php5 .php
```
=> https://www.howtoforge.com/installing-apache2-with-php5-and-mysql-support-on-fedora-18-lamp Some hints here.
### Building genenetwork1
For the python2.4 packages
```
gaeta:~/guix-past$ guix build -L ~/guix-past/modules/ -L ~/guix-bioinformatics/ genenetwork1
```
Gets
```
`thirdparty/htmlgen/polyfunc.py' -> `/gnu/store/hh21dq96kbmby3dks45ngxd6lzx1lx83-python24-htmlgen-GN1-2.5/lib/python2.4/site-packages/htmlgen//polyfunc.py'
phase `install' succeeded after 0.0 seconds
starting phase `add-install-to-pythonpath'
error: in phase 'add-install-to-pythonpath': uncaught exception:
wrong-type-arg "string-append" "Wrong type (expecting ~A): ~S" ("string" #f) (#f)
phase `add-install-to-pythonpath' failed after 0.0 seconds
Backtrace:
9 (primitive-load "/gnu/store/5x73mpqayj6xi2ag5l8yblvh4hv…")
In guix/build/gnu-build-system.scm:
906:2 8 (gnu-build #:source _ #:outputs _ #:inputs _ #:phases . #)
In ice-9/boot-9.scm:
1752:10 7 (with-exception-handler _ _ #:unwind? _ # _)
In srfi/srfi-1.scm:
634:9 6 (for-each #<procedure 7fffeff39000 at guix/build/gnu-b…> …)
In ice-9/boot-9.scm:
1752:10 5 (with-exception-handler _ _ #:unwind? _ # _)
In guix/build/gnu-build-system.scm:
927:23 4 (_)
In guix/build/python-build-system.scm:
186:28 3 (add-installed-pythonpath (("python" . "/gnu/store…") …) …)
In unknown file:
2 (string-append "/gnu/store/hh21dq96kbmby3dks45ngxd6lzx…" …)
In ice-9/boot-9.scm:
1685:16 1 (raise-exception _ #:continuable? _)
1685:16 0 (raise-exception _ #:continuable? _)
ice-9/boot-9.scm:1685:16: In procedure raise-exception:
In procedure string-append: Wrong type (expecting string): #f
builder for `/gnu/store/m4cvh8f83ry9saja47ap7bgzmc58gmk1-python24-htmlgen-GN1-2.5.drv' failed with exit code 1
build of /gnu/store/m4cvh8f83ry9saja47ap7bgzmc58gmk1-python24-htmlgen-GN1-2.5.drv failed
View build log at '/var/log/guix/drvs/m4/cvh8f83ry9saja47ap7bgzmc58gmk1-python24-htmlgen-GN1-2.5.drv.gz'.
guix build: error: build of `/gnu/store/m4cvh8f83ry9saja47ap7bgzmc58gmk1-python24-htmlgen-GN1-2.5.drv' failed
```
|
