blob: 9a266b9a2e94126c18e9e5471a8122f2376c2c54 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
|
# Fix load-rdf.scm script
* assigned: bonfacem
At the moment, running load-rdf.scm in tux02 results in the following stack trace:
```
OpenLink Virtuoso Interactive SQL (Virtuoso)
Version 07.20.3236 as of Jan 1 1970
Type HELP; for help and EXIT; to exit.
SQL> SQL> SQL>
*** Error S2801: [Virtuoso Driver]CL033: Connect failed to localhost:8982 = localhost:8982.
at line 3 of Top-Level:
DELETE FROM rdf_quad WHERE g = iri_to_id ('http://genenetwork.org')
Backtrace:
In ice-9/boot-9.scm:
1752:10 8 (with-exception-handler _ _ #:unwind? _ # _)
In unknown file:
7 (apply-smob/0 #<thunk 7fed6c9d8080>)
In ice-9/boot-9.scm:
724:2 6 (call-with-prompt _ _ #<procedure default-prompt-handle…>)
In ice-9/eval.scm:
619:8 5 (_ #(#(#<directory (guile-user) 7fed6c9dec80>)))
In ice-9/boot-9.scm:
2835:4 4 (save-module-excursion _)
4380:12 3 (_)
In load-rdf.scm:
181:15 2 (main . _)
167:4 1 (time-thunk #<procedure 7fed6a3fcd00 at load-rdf.scm:18…>)
117:24 0 (call-with-pipe _ _ _ . _)
load-rdf.scm:117:24: In procedure call-with-pipe:
Invocation of program failed ("isql")
```
See the following for the fix:
=> https://github.com/genenetwork/dump-genenetwork-database/pull/7/commits/07a5516df398d52ad31a16a4fbd1809c78177969 07a5516
* closed
|
