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2022-12-05Moving features to gn-doc repoPjotr Prins
2022-12-03Found publications that use search in GeneNetworkPjotr Prins
2022-11-25topics: (virtuoso): Update link to commitFrederick Muriuki Muriithi
* topics/systems/virtuoso.gmi: Update link to the commit in the documentation.
2022-11-23Create a topic that discusses phenotype naming conventionsMunyoki Kilyungi
2022-11-02Add "User Registration" and "Password Reset" topicsFrederick Muriuki Muriithi
* While not core to the auth(entic|oris)ation topic, "User Registration" and "Password Reset" are related to, the auth(entic|oris)ation process.
2022-11-01search: add Ashbrook paperPjotr Prins
2022-11-01Notes on searchPjotr Prins
2022-11-01Topics: Add authetication implementation concernsFrederick Muriuki Muriithi
* topics/authentication/authentication-authorisation-design.gmi
2022-11-01Topics: Flesh out the Auth(entic|oris)ation DesignFrederick Muriuki Muriithi
* topics/authentication/authentication-authorisation-design.gmi: Add more information on the authentication and authorisation systems to help clarify the design paradigm.
2022-10-31Topics: Make links relative to top-level domainFrederick Muriuki Muriithi
* topics/authentication/authentication-authorisation-design.gmi: make links relative to top-level domain.
2022-10-31Topics: Format links correctlyFrederick Muriuki Muriithi
* topics/authentication/authentication-authorisation-design.gmi: Format the links as links, not bullet lists.
2022-10-31Topics: topics/authentication/authentication-authorisation-design.gmiFrederick Muriuki Muriithi
* topics/authentication/authentication-authorisation-design.gmi: Add notes on groups and roles. Also link in related issues.
2022-10-30Document xapian indexing performance bottlenecks.Arun Isaac
2022-10-27drop server: add scriptingPjotr Prins
2022-10-27Added some notes on permissionsPjotr Prins
2022-10-27- Added taskPjotr Prins
- Add documentation on creating a backup drop service using sftp/sshfs
2022-10-25Document virtuoso password change commands.Arun Isaac
2022-10-25Notes on tasks and servicesPjotr Prins
2022-10-25Update orchestrationPjotr Prins
2022-10-23Added note on Encoding for Robust Immutable Storage (ERIS)Pjotr Prins
2022-10-20OrchestrationPjotr Prins
2022-10-19Add RISC-V debugging using GDB and QEMU.Arun Isaac
2022-10-17DesignPjotr Prins
2022-10-16Adding linksPjotr Prins
2022-10-13pjotrp: updated tasksPjotr Prins
2022-10-12Make the ci-cd issue a topicMunyoki Kilyungi
* issues/systems/ci-cd.gmi: Move this... * topics/systems/ci-cd.gmi: ... here. Also add some of the work done.
2022-10-12Close issue on automated testing and create a separate topic for itMunyoki Kilyungi
* issues/automated-testing.gmi: Close and point a link to the topic on the same. * topics/automated-testing.gmi: New topic.
2022-10-11Correct xapian scalability figures for SQL database access.Arun Isaac
Earlier, the time estimates included the time taken to retrieve the documents from the SQL database. This is now removed giving a clearer picture of xapian scalability.
2022-10-10Round off xapian scalability figures.Arun Isaac
2022-10-10Comment on xapian scalability.Arun Isaac
2022-10-09Expanded on orchestration/servicesPjotr Prins
2022-10-09Updated info on using guix-profiles with genenetwork2Pjotr Prins
2022-10-08shepherd: add infoPjotr Prins
2022-10-07File sharing with cgitPjotr Prins
2022-10-07Publishing files in lieu of ipfsPjotr Prins
2022-10-06Create a list of useful shell scripts for day-to-day workMunyoki Kilyungi
* topics/useful-shell-scripts.gmi: New file
2022-10-06Add new resource for sharing useful shell scriptsMunyoki Kilyungi
* topics/useful-shell-scripts.gmi: New topic.
2022-10-06guix-profile: Use the correct command for sourcing a profileMunyoki Kilyungi
* topics/guix-profiles.gmi: Fix command for updating a profile.
2022-10-06Topic: file sharing and replace IPFSPjotr Prins
2022-10-05Updated info on guix-profilesPjotr Prins
2022-09-30Add database_connection to exampleMunyoki Kilyungi
* topics/maybe-monad.gmi: Add database_connection to example snippet. Add missing ":" to example.
2022-09-30Document passing conn object to sql_query_mdictMunyoki Kilyungi
* topics/maybe-monad.gmi: Update example snippet.
2022-09-30Add extra topics to the coding-guidelinesMunyoki Kilyungi
* topics/coding-guidelines.gmi: Add extra topics.
2022-09-30Refine ideas on adding metadata to the traits pageMunyoki Kilyungi
2022-09-30Update titleMunyoki Kilyungi
* topics/code-antipatterns.gmi: Update title.
2022-09-29Replace MonadicDictCursor with sql_query_mdict.Arun Isaac
2022-09-29Note coding anti-patterns observed in GN codeMunyoki Kilyungi
* topics/code-antipatterns: New file.
2022-09-28Updated information on building a guix profile using a channel on productionPjotr Prins
* topics/guix-profiles.gmi: updated
2022-09-28Add design doc for annotating the trait pageMunyoki Kilyungi
* topics/add-metadata-to-trait-page.gmi: New topic.
2022-09-27topics: fix typo in documentation.Frederick Muriuki Muriithi