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2021-10-09Tux02 setupPjotr Prins
2021-10-09Tux02 setupPjotr Prins
2021-10-09machinesPjotr Prins
2021-10-09machinesPjotr Prins
2021-10-07Tux02 is going to run productionPjotr Prins
2021-10-07GN1 time machinesPjotr Prins
2021-10-06sheepdog: update tasksPjotr Prins
2021-10-06Sheepdog and machine roomPjotr Prins
2021-10-06sheepdogPjotr Prins
2021-10-06backupsPjotr Prins
2021-10-04Add topic on reproducibilityjgart
2021-10-01Pjotr notesPjotr Prins
2021-10-01New Issue: Non-Clustered and Flippable HeatmapsFrederick Muriuki Muriithi
* Add new "issue" to track the migration of heatmaps without the dendrograms and also allow the flipping of the heatmap from horizontal to vertical orientations and vice-versa.
2021-10-01Adds guix container topic to notebooksjgart
2021-10-01Add jupyter cli options link to our notes on jupyterjgart
2021-09-29backupsPjotr Prins
2021-09-24Add tasksPjotr Prins
2021-09-24Reinstate backups to epysodePjotr Prins
2021-09-22Add binderlite static assets issue to issues directoryjgart
2021-09-20Add tags sectionFrederick Muriuki Muriithi
* Add a tags section to track things like "assigned to" etc.
2021-09-20More details regarding error contextjgart
2021-09-20Add error regarding static assets after forwarding binderlite with nginxjgart
2021-09-20Adds nginx question regarding $rest argjgart
https://git.genenetwork.org/jgart/binderlite/src/branch/master/nginx.conf#L36
2021-09-20Add binderlite port map that I'm currently usingjgart
2021-09-20Adds feature request idea for GeneNetwork CLIjgart
closes https://github.com/genenetwork/genenetwork3/issues/39
2021-09-17Added issue on BNW not responding.Pjotr Prins
2021-09-16Add topic for authentication workBonfaceKilz
2021-09-15tasksPjotr Prins
2021-09-15Remove kanban symlinks and add tagPjotr Prins
2021-09-13Adds --ad-hoc to guix environment commandjgart
Python dependencies are not available unless I use --ad-hoc or -m
2021-09-10Comments on JupyterPjotr Prins
2021-09-10kill-jupyter permissions on penguin2jgart
I want to run the following on penguin2: ps aux | grep jupyter | awk '{ print $2 }' | xargs kill -9
2021-09-09Add current user-stories for binderlitejgart
* Next Steps ** Optimizations *** Uniquely identify last built notebook *** Shutdown notebook and save to memory *** Shutdown kernels gracefully *** guix-kernel (AKA guix-jupyter) runs by default in a container
2021-09-09Update issue with progressMuriithi Frederick Muriuki
2021-09-09Merge branch 'main' of github.com:genenetwork/gn-gemtext-threadsMuriithi Frederick Muriuki
2021-09-09Update status of implementation effortsMuriithi Frederick Muriuki
* topics/gn1-migration-to-gn2/clustering.gmi: update status * topics/gn1-migration-to-gn2/sample_clustering_heatmap.png: add missing sample heatmap image
2021-09-08Add extra topic on adding delete button for datasetsBonfaceKilz
2021-09-01JupyterPjotr Prins
2021-08-31Add websocketd as a possible alternative to xtermjsjgart
Turn any program that uses STDIN/STDOUT into a WebSocket server. Like inetd, but for WebSockets.
2021-08-31virtuoso: remove password to avoid confusionPjotr Prins
2021-08-31pluto service and working on fallbacksPjotr Prins
2021-08-31Update with progressMuriithi Frederick Muriuki
* Update issue with progress on genotype files
2021-08-30Update with progress and notesMuriithi Frederick Muriuki
* Update issue with notes on traits file and strains in genotype file * Add notes on required TODOs
2021-08-30Update issue with progress and notesMuriithi Frederick Muriuki
* Add notes on progress * Add notes on the genotype files, that is still not quite clear, to help with tracing the flow of information
2021-08-27Instructions for virtuosoPjotr Prins
2021-08-26Merge branch 'main' of github.com:genenetwork/gn-gemtext-threadsMuriithi Frederick Muriuki
2021-08-26Update issue with findings on rust-qtlreaperMuriithi Frederick Muriuki
* The usage of ~rust-qtlreaper~ in GN2 is not quite clear. This commit details the findings of the search for the usage of ~rust-qtlreaper~ in GN2 and the attempts to replicate in GN3.
2021-08-22Adds TODO item (unit tests)jgart
2021-08-22Adds TODO itemjgart
2021-08-22Add current TODOsjgart