Age | Commit message (Collapse) | Author | |
---|---|---|---|
2022-06-21 | genotype-database: Document reading the entire matrix. | Arun Isaac | |
* topics/genotype-database.gmi: Document reading the entire matrix using the genodb.nparray function. | |||
2022-06-20 | misc-ui-fixes: Fix typo | BonfaceKilz | |
2022-06-20 | Update "misc-ui-fixes" | BonfaceKilz | |
Mark some TODOs with a "-". Also, make "tags" a sub-heading | |||
2022-06-20 | Reassign "TempDataSet-object-has-no-attribute" to Alex | BonfaceKilz | |
2022-06-20 | Assign to misc-ui-fixes to Munyoki and Ethan | BonfaceKilz | |
2022-06-20 | Update issue on misc-ui fixes | BonfaceKilz | |
2022-06-15 | Fix typo | BonfaceKilz | |
2022-06-15 | Fix URL | Saunak Sen | |
2022-06-15 | Update fix-scree-plot.gmi | Saunak Sen | |
2022-06-15 | update issue: implement parallel correlation with rust | Alexander | |
2022-06-15 | virtuoso: Document hack to get PID of container shepherd. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Running virtuoso)[Running virtuoso in a guix system container]: Document hack to get PID of container shepherd. | |||
2022-06-15 | virtuoso: Use /run/current-system/... path to bash in container. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Running virtuoso)[Running virtuoso in a guix system container]: Use /run/current-system/... path to bash in container. | |||
2022-06-15 | virtuoso: Enter all namespaces with `nsenter -a'. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Running virtuoso)[Running virtuoso in a guix system container]: Enter all namespaces with `nsenter -a'. | |||
2022-06-14 | topics: virtuoso: Fix wrong grammar | BonfaceKilz | |
2022-06-14 | topics: virtuoso: Note that conductor interface isn't supported | BonfaceKilz | |
2022-06-14 | topics: virtuoso: Note that "/dev/sdX" is non-consequential | BonfaceKilz | |
2022-06-14 | topics: virtuoso: Add extra docs on how to run sparql using web UI | BonfaceKilz | |
* topics/systems/virtuoso.gmi (Running SPARQL Queries using isql): Add more detailed section of how to access SPARQL using both the web interface and sqli. | |||
2022-06-14 | topics: virtuoso: Document how to inspect a system-container | BonfaceKilz | |
* topics/systems/virtuoso.gmi (Running virtuoso in a guix system container): Demonstrate, using `nsenter`, how one would inspect a system container. | |||
2022-06-14 | topics: virtuoso: Document how to run sparql queries using isql | BonfaceKilz | |
* topics/systems/virtuoso.gmi (Running Queries using isql): Document how to use isql to run sparql queries using a guix shell. | |||
2022-06-14 | virtuoso: Remove unnecessary root file system definition. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Running virtuoso): Remove unnecessary root file system definition. | |||
2022-06-14 | guix-profiles: Use public path to guix-bioinformatics channel. | Arun Isaac | |
An "Arun-specific path" was accidentally added in an earlier commit. | |||
2022-06-14 | List closed issues on a separate page. | Arun Isaac | |
* closed.skb: New file. * index.skb: Link to closed.html instead of listing closed issues. * tissue.scm (#:web-files): Add closed.html. | |||
2022-06-14 | topics: Explain use of Guix profiles for development. | Arun Isaac | |
* topics/guix-profiles.gmi: New file. | |||
2022-06-09 | Link to Continuous Integration. | Arun Isaac | |
* index.skb: Link to Continuous Integration. | |||
2022-06-09 | topics: genotype-database: Use new functional interface. | Arun Isaac | |
* topics/genotype-database.gmi: Use new functional interface. | |||
2022-06-08 | skin | Pjotr Prins | |
2022-06-08 | topics: genotype-database: Document reading columns. | Arun Isaac | |
* topics/genotype-database.gmi: Document reading columns in Python. | |||
2022-06-07 | topics: virtuoso: Fix misspelling of "Protocol". | Arun Isaac | |
* topics/systems/virtuoso.gmi (Loading data into virtuoso): Fix misspelling of "Protocol" changing "Protocal" to "Protocol". | |||
2022-06-03 | topics: Document genotype databases. | Arun Isaac | |
* topics/genotype-database.gmi: New file. | |||
2022-05-26 | Update issue with progress. | Frederick Muriuki Muriithi | |
2022-05-26 | Move post on debugging with pudb into it's Topics | BonfaceKilz | |
2022-05-26 | Add blog post on using pdb | BonfaceKilz | |
2022-05-26 | Add blog post on debugging using pdb | BonfaceKilz | |
2022-05-26 | Close issue as completed. | Frederick Muriuki Muriithi | |
2022-05-25 | Close some issues | BonfaceKilz | |
2022-05-25 | Update issue on editing metadata | BonfaceKilz | |
2022-05-19 | Add .gmi extension | zsloan | |
Forgot to add this when creating the file | |||
2022-05-19 | Create fix-scree-plot | zsloan | |
2022-05-19 | Close add-collection-import since it's finished | zsloan | |
2022-05-16 | Close issue with some updates | Frederick Muriuki Muriithi | |
2022-05-16 | New issue: Menu generation improvements | Frederick Muriuki Muriithi | |
2022-05-16 | New Issue: Remove extra pcorrs options | Frederick Muriuki Muriithi | |
2022-05-16 | New Issue: Missing CI/CD Definitions | Frederick Muriuki Muriithi | |
Issue tracks the implementation of missing CI/CD definitions for "service daemons" | |||
2022-05-11 | Create fix-correlation-table.gmi | zsloan | |
2022-05-06 | Added link; minor text edits | Pjotr Prins | |
2022-05-06 | List developer links. | Arun Isaac | |
* topics/links.gmi: New file. * index.skb: Link to it. | |||
2022-05-05 | topics: Move virtuoso passwords documentation. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Virtuoso users and setting their passwords): Rename to ... (Set passwords for virtuoso users): ... this, and move to after "Running virtuoso". | |||
2022-05-05 | topics: Simplify virtuoso introduction. | Arun Isaac | |
* topics/systems/virtuoso.gmi: Simplify introduction. | |||
2022-05-05 | topics: Document minimal virtuoso configuration. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Running virtuoso): Document manually running virtuoso on the command-line with a minimal configuration. (Virtuoso.ini): Delete section. | |||
2022-05-05 | topics: Document RDF validation, virtuoso graph loading and deletion. | Arun Isaac | |
* topics/systems/virtuoso.gmi (Loading data into virtuoso): Document RDF validation, virtuoso graph loading and deletion. |