diff options
Diffstat (limited to 'topics')
| -rw-r--r-- | topics/meetings/jnduli_bmunyoki.gmi | 42 |
1 files changed, 36 insertions, 6 deletions
diff --git a/topics/meetings/jnduli_bmunyoki.gmi b/topics/meetings/jnduli_bmunyoki.gmi index 87417f5..a7eb40f 100644 --- a/topics/meetings/jnduli_bmunyoki.gmi +++ b/topics/meetings/jnduli_bmunyoki.gmi @@ -1,5 +1,24 @@ # Meeting Notes +# 2024-08-23 +* @shelby re-ingest data and run RAGAs against the queries already in the system to perform comparison with new papers. +* @shelby figure out Claude Sonnet stuff. +* IN PROGRESS: @felix @fred push RQTL bundles to uploader, also includes metadata. +* IN PROGESS: @felix look for means to fix metadata challenge ie. trouble associating data we upload and metadata that provides descriptions. +* @bmunyoki API: Get all RIF metadata by symbols from rdf. +* @bmunyoki UI: Modify traits page to have "GN2 (GeneWiki)" +* @bmunyoki UI: Integrate with API +* @bmunyoki Replicate GN1 WIKI+RIF in GN2. +* @bmunyoki and @alex help Alex deploy gn-guile code on tux02. +* @bmunyoki @jnduli review gn2 UI change for markdown editor +* @bmunyoki create template for bio paper +* @alex sync with Boni to set up gn-guile +* @alex @bmunyoki @jnduli sync to plan out work for llm integration +* @jnduli edit WIKI+RIF +* @jnduli set up gn-uploader locally and improve docs +* @jnduli complete design doc for hooks system for gn-auth +* @felix to document email threads on gemtext + ## 2024-08-22 => https://issues.genenetwork.org/issues/edit-rif-metadata APIs for wiki editting and broke down wiki-editting task to sub-projects. @@ -42,16 +61,27 @@ Game Plan: * @felix look for means to fix metadata challenge ie. trouble associating data we upload and metadata that provides descriptions. * @felix @jnduli programming learning: started building a web server to learn backend using Flask. * @felix @jnduli Read Shelby's paper and provide feedback by the end of Saturday. -* @shelby figure out Claude Sonnet stuff. -* @bmunyoki implementation code work to edit Rif + WIki SQL n RDF data. + +## 2024-08-16 +* DONE: @jnduli Fix failing unit tests on GN-Auth. +* NOT DONE: @jnduli Exploring Mechanical Rob for Integration Tests. GN-Auth should be as stable as possible. +* NOT DONE: @jnduli Research e-mail patch workflow and propose a sane workflow for GN through an engineering blog post. +* DONE: @jnduli Help @alexm with auth work. +* IN PROGRESS: @felix @fred push RQTL bundles to uploader, also includes metadata. +* IN PROGRESS: @felix look for means to fix metadata challenge ie. trouble associating data we upload and metadata that provides descriptions. +* DONE: @felix @jnduli programming learning: started building a web server to learn backend using Flask. Learning html and css and will share the progress with this. +* DONE: @felix ~@jnduli~ Read Shelby's paper and provide feedback by the end of Saturday. +* DONE: @felix tested the time tracker script. +* IN PROGRESS: @bmunyoki implementation code work to edit Rif + WIki SQL n RDF data. We'll break this down. * @bmunyoki and @alex help Alex deploy gn-guile code on tux02. -* @bmunyoki Replicate GN1 WIKI+RIF in GN2. +* NOT DONE: @bmunyoki Replicate GN1 WIKI+RIF in GN2. * @shelby @bonfacem @alex Integrate QNQA Search to global search. +* @shelby handling edits with the current open paper Nice To Have: -* @felix figure out how to fix large data uploads ie. most data sets are large e.g. 45GB. Uploader cannot handle these large files. -* @felix Try out John's time tracking tool and provide feedback. -* @shelby run RAGAs against the queries already in the system to perform comparison with new papers. +* DEPRIORITIZED: @felix figure out how to fix large data uploads ie. most data sets are large e.g. 45GB. Uploader cannot handle these large files. +* DONE: @felix Try out John's time tracking tool and provide feedback. +* @shelby run RAGAs against the queries already in the system to perform comparison with new papers: re-ingesting, now at 1500 papers. * @bmunyoki Send out emails to the culprit on failing tests in CI/CD. ## 2024-08-15 |