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Diffstat (limited to 'topics/systems/restore-backups.gmi')
| -rw-r--r-- | topics/systems/restore-backups.gmi | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/topics/systems/restore-backups.gmi b/topics/systems/restore-backups.gmi index 4e2843f..d64e7b9 100644 --- a/topics/systems/restore-backups.gmi +++ b/topics/systems/restore-backups.gmi @@ -95,3 +95,34 @@ root@tux02:/var/lib# chown mysql.mysql mysql And we are running. Next stop update genotype files. + +## Files + +GN has a file repo for genotype files, lmdb and such, next to MariaDB. Typically + +``` +root@tux02:/home/gn2/production/genotype_files# du -sh . +38G . +``` + +the backup in drop lists, for example + +``` +root@tux02:/export5/backup/bacchus/drop/tux01# borg list borg-genenetwork/ +borg-GN2-home-20230207-04:00-Tue Mon, 2023-02-06 22:00:02 +borg-GN1-home-20230207-04:40-Tue Mon, 2023-02-06 22:40:01 +borg-GN3-home-20230207-04:41-Tue Mon, 2023-02-06 22:41:27 +borg-GN2s-home-20230207-04:41-Tue Mon, 2023-02-06 22:41:45 +borg-ZACH-home-20230207-04:42-Tue Mon, 2023-02-06 22:42:01 +borg-datafiles-home-20230207-04:42-Tue Mon, 2023-02-06 22:42:32 +``` + +At this poing ZACH-home is the main dir, so this fetches all files + +``` +borg extract --verbose borg-genenetwork::borg-ZACH-home-20230207-04:42-Tue home/zas1024/gn2-zach/genotype_files +``` + +and we copy it to /home/gn2/production. + +We also have a separate data files 'warehouse', but that is not linked up with the webserver right now. |