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Diffstat (limited to 'topics/systems/mariadb')
| -rw-r--r-- | topics/systems/mariadb/precompute-mapping-input-data.gmi | 13 |
1 files changed, 13 insertions, 0 deletions
diff --git a/topics/systems/mariadb/precompute-mapping-input-data.gmi b/topics/systems/mariadb/precompute-mapping-input-data.gmi index 24b052c..977120d 100644 --- a/topics/systems/mariadb/precompute-mapping-input-data.gmi +++ b/topics/systems/mariadb/precompute-mapping-input-data.gmi @@ -53,6 +53,19 @@ More recent incarnations are at v8, including a PublishData version that can be => https://github.com/genenetwork/genenetwork2/tree/testing/scripts/maintenance +Note that the locations are on space: + +``` +cd /mount/space2/lily-clone/acenteno/GN-Data +ls -l +python QTL_Reaper_v8_space_good.py 116 +-- +python UPDATE_Mean_MySQL_tab.py +cd /mount/space2/lily-clone/gnshare/gn/web/webqtl/maintainance +ls -l +python QTL_Reaper_cal_lrs.py 7 +``` + The first task is to prepare an update script that can run a set at a time and compute GEMMA output (instead of reaper). The script first fetches inbredsets |