diff options
Diffstat (limited to 'topics/systems/mariadb/precompute-mapping-input-data.gmi')
| -rw-r--r-- | topics/systems/mariadb/precompute-mapping-input-data.gmi | 10 |
1 files changed, 8 insertions, 2 deletions
diff --git a/topics/systems/mariadb/precompute-mapping-input-data.gmi b/topics/systems/mariadb/precompute-mapping-input-data.gmi index 977120d..3442d4e 100644 --- a/topics/systems/mariadb/precompute-mapping-input-data.gmi +++ b/topics/systems/mariadb/precompute-mapping-input-data.gmi @@ -2,7 +2,7 @@ GN relies on precomputed mapping scores for search and other functionality. Here we prepare for a new generation of functionality that introduces LMMs for compute and multiple significant scores for queries. -At this stage we precompute GEMMA and tarball or lmdb it. As a project is never complete we need to add a metadata record in each tarball that track the status of the 'package'. Also, to offload compute to machines without DB access we need to prepare a first step that contains genotypes and phenotypes for compute. The genotypes have to be shared, as well as the computed kinship with and without LOCO. See +At this stage we precompute GEMMA and tarball or lmdb it. As a project is never complete we need to add a metadata record in each tarball that tracks the status of the 'package'. Also, to offload compute to machines without DB access we need to prepare a first step that contains genotypes and phenotypes for compute. The genotypes have to be shared, as well as the computed kinship with and without LOCO. See => /topics/data/precompute/steps @@ -43,7 +43,13 @@ And after: # Info -## Original qtlreaper version +## Original qtlreaper version for PublishData + +See the writeup at + +=> ./precompute-publishdata + +## Original qtlreaper version for ProbeSetData The original reaper precompute lives in |