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Diffstat (limited to 'topics/meetings/jnduli_bmunyoki.gmi')
| -rw-r--r-- | topics/meetings/jnduli_bmunyoki.gmi | 31 |
1 files changed, 22 insertions, 9 deletions
diff --git a/topics/meetings/jnduli_bmunyoki.gmi b/topics/meetings/jnduli_bmunyoki.gmi index 8afe4f1..6c4d758 100644 --- a/topics/meetings/jnduli_bmunyoki.gmi +++ b/topics/meetings/jnduli_bmunyoki.gmi @@ -1,17 +1,30 @@ # Meeting Notes +## 2024-10-08 +* @bonfacem RIF Indexing for RIF page in Xapian. +* @bonfacem: Test the production container locally and provide @fredm some feedback. +* @shelbys @bonfacem: Getting RDF into R2R. +* @flisso: Follow up with the Medaka team on verification of genotype sample names. +* @flisso: Figure out how to add C Elegans data in staging. +* @flisso: Set up virtuoso. @bonfacem shall share notes on this. +* @flisso: Write PhD concept note. +* @shelbys: Be able to test things on lambda01 for LLM tests. +* @alexm @jnduli: R/Qtl script. + ## 2024-10-18 -* @priscilla @flisso: Set up mariadb and virtuoso to test out some GN3 endpoints. -* @priscilla @flisso @bmunyoki: Improve docs while hacking on the above. +* IN-PROGRESS: @priscilla @flisso: Set up mariadb and virtuoso to test out some GN3 endpoints. NOTE: Mariadb set-up +* NOT DONE: @priscilla @flisso @bmunyoki: Improve docs while hacking on the above. * @jnduli Remove gn-auth code from GN3. * @jnduli Resolve current issue with broken auth in gn-qa. -* @jnduli @alexm Work on the R/Qtl design doc. -* @flisso MIKK genotyping. -* @flisso Make sure we have C Elegans and HS Rats dataset to testing, and have the genotyping pipeline working. -* @shelbys: Modify existing Grant write-up for pangenomes. -* @shelbys @bonfacem: Getting RDF into R2R. -* @bonfacem RIF Indexing for RIF page in Xapian. -* @bonfacem Work on properly containerizing gn-guile. +* DONE: @jnduli @alexm Work on the R/Qtl design doc. +* IN-PROGRESS: @alexm: R/Qtl script. NOTE: Reviewed by @jnduli. +* DONE: @flisso MIKK genotyping. NOTE: Verification pending from Medaka team. +* DONE: @flisso Make sure we have C Elegans and HS Rats dataset to testing, and have the genotyping pipeline working. NOTE: Issues with tux02 staging server. +* DONE: @shelbys: Modify existing Grant write-up for pangenomes. NOTES: Some more edits to be done. +* NOT DONE: @shelbys @bonfacem: Getting RDF into R2R. +* NOT DONE: @bonfacem RIF Indexing for RIF page in Xapian. +* DONE: @bonfacem Work on properly containerizing gn-guile. NOTE: Send in patches to @alexm, @aruni, and @fredm to review later today. +* DONE: @bonfacem: Fix the virtuoso CI job in CD: NOTE: I'm awaiting feedback from @arun/@fredm. ## 2024-10-11 * WIP @priscilla @flisso: Try out API endpoints that don't require auth. NOTE: Priscilla got to set-up guix channels for gn3. Felix ran into problems. Priscilla set up the MySQL in her Ubuntu system. |