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Diffstat (limited to 'topics/genome-browser')
| -rw-r--r-- | topics/genome-browser/hoot-genome-browser.gmi | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/topics/genome-browser/hoot-genome-browser.gmi b/topics/genome-browser/hoot-genome-browser.gmi new file mode 100644 index 0000000..219fda5 --- /dev/null +++ b/topics/genome-browser/hoot-genome-browser.gmi @@ -0,0 +1,21 @@ +# Hoot Genome Browser + +Together with Andrew we have created a genome browser that runs in WASM. Safari recently (202509) added critical hoot support, so we should have it in all important browsers now! + +With this task tracker we want to embed the existing browser in GN and add tracks for mapped QTL. + +# Tags + +* assigned: andrewt, pjotrp +* priority: high +* status: open, in progress +* keywords: mapping + +# Tasks + +* [ ] Embed hoot browser in GN2 as a pilot +* + [ ] Guix package for JS and minimal JBrowse2? +* + [ ] Embedding code in GN2 +* [ ] Create two tracks for QTL comparisons - vector data available +* [ ] Create BED file for matched QTL - use SPARQL live? +* [ ] Annotated SNPs |