diff options
Diffstat (limited to 'topics/biohackathon')
| -rw-r--r-- | topics/biohackathon/GNGSoC2023.gmi | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/topics/biohackathon/GNGSoC2023.gmi b/topics/biohackathon/GNGSoC2023.gmi index a5f9019..7863bcd 100644 --- a/topics/biohackathon/GNGSoC2023.gmi +++ b/topics/biohackathon/GNGSoC2023.gmi @@ -63,6 +63,10 @@ git repo genenetwork-machines, guix-bioinformatics * Towards a new workbench with cgit support +### Week 7 + +* Arun has cgit running on his own server - soon bringing up tux02 after resolving https + ### More => https://ci.genenetwork.org/jobs/guix-bioinformatics @@ -121,6 +125,10 @@ git repo genenetwork3 ### Week 6 * Improvements on RDF +### Week 7 + +* RDF improvements with ontology +* Inconsistencies and privacy discussion today ## LLMs & metadata (RDF) @@ -166,6 +174,9 @@ git repo genenetwork3 ### Week 6 * Very close to a working flask app Rupert can try next week +### Week 7 + +* Working FLASK app ready for testing - Rupert will have a go ## API to access data from GN @@ -220,6 +231,11 @@ git repo gn-docs & genenetwork3 & SPARQL * API ready for running in a production environment * Using latest RDF +### Week 7 + +* Test version of API is running at https://luna.genenetwork.org/api/v2.0/ +* We'll continue building up facilities + ## Editing data * lead: Fred @@ -250,6 +266,10 @@ git repo gn-docs & genenetwork3 & SPARQL * Progress on authorization and editing +### Week 7 + +* Fred has moved code into a new repo for https://github.com/genenetwork/gn-auth + ## Guix parametrization * lead: Sarthak @@ -283,6 +303,10 @@ git repo gn-docs & genenetwork3 & SPARQL * Posted BLOG and started implementation +### Week 7 + +* Agreed on final deliverables for GSoC + ## Links * Matrix room is GNSoC2023 |