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-rw-r--r--topics/biohackathon/GNGSoC2023.gmi26
1 files changed, 25 insertions, 1 deletions
diff --git a/topics/biohackathon/GNGSoC2023.gmi b/topics/biohackathon/GNGSoC2023.gmi
index 623a6c6..a5f9019 100644
--- a/topics/biohackathon/GNGSoC2023.gmi
+++ b/topics/biohackathon/GNGSoC2023.gmi
@@ -59,6 +59,10 @@ git repo genenetwork-machines, guix-bioinformatics
* Added Klaus server for git
* Fixed channels to work wit Python 3.9 instead of 3.10
+### Week 6
+
+* Towards a new workbench with cgit support
+
### More
=> https://ci.genenetwork.org/jobs/guix-bioinformatics
@@ -112,7 +116,11 @@ git repo genenetwork3
* Metadata - renamed prefixes
* Short names gn: gnt:
* Updated virtuoso
-* parsing geno files - lmdb support
+* parsing geno files - lmdb support
+
+### Week 6
+
+* Improvements on RDF
## LLMs & metadata (RDF)
@@ -155,6 +163,10 @@ git repo genenetwork3
* Expose container to Rupert
* Add a password
+### Week 6
+
+* Very close to a working flask app Rupert can try next week
+
## API to access data from GN
* lead: Rupert
@@ -203,6 +215,11 @@ git repo gn-docs & genenetwork3 & SPARQL
* Added back-end support for wikidata - finding inconsistencies
+### Week 6
+
+* API ready for running in a production environment
+* Using latest RDF
+
## Editing data
* lead: Fred
@@ -229,6 +246,9 @@ git repo gn-docs & genenetwork3 & SPARQL
* Editing has gone on production - fixing issues
* Discussion on REST API
+### Week 6
+
+* Progress on authorization and editing
## Guix parametrization
@@ -259,6 +279,10 @@ git repo gn-docs & genenetwork3 & SPARQL
* Proposed DSL for parameters
+### Week 6
+
+* Posted BLOG and started implementation
+
## Links
* Matrix room is GNSoC2023