summaryrefslogtreecommitdiff
path: root/tasks/pjotrp.gmi
diff options
context:
space:
mode:
Diffstat (limited to 'tasks/pjotrp.gmi')
-rw-r--r--tasks/pjotrp.gmi31
1 files changed, 20 insertions, 11 deletions
diff --git a/tasks/pjotrp.gmi b/tasks/pjotrp.gmi
index 0db8ace..5aeeafb 100644
--- a/tasks/pjotrp.gmi
+++ b/tasks/pjotrp.gmi
@@ -18,19 +18,14 @@ The tasks here should probably be broken out into appropriately tagged issues, w
Now
-* [+] Shelby's application and biosketch
+* [+] Shelby's application
* [.] Check Tony's list and improve search for SNPs and Hs
* [.] GeneNetwork paper
-* [ ] Machine room security and access for bonz, fred, shelby, others...
-* [ ] Set up student VM
-* [.] Tree of life
-
-* [ ] Check backups of etc etc.
-* [ ] Frontend for GN4MSK
-* [ ] GeneNetwork consortium
Later
+* [.] Tree of life
+* [+] Machine room security and access for bonz, fred, shelby, others...
* [ ] Hao's idea for counting cis-qtl
* [ ] Batch run GEMMA and faster file handling
* [ ] Run any2any alignments of pathogens
@@ -52,8 +47,18 @@ Later
=> ./dana.gmi See Dan's list for machine room
+* [ ] get data from summer211.uthsc.edu (access machine room)
+* [ ] decommission out-racked machines (whith @arthurc)
+* [ ] space server out-of-band
+* [ ] Frontend for GN4MSK
+* [ ] Check backups of etc etc.
+* [ ] GeneNetwork consortium
+* [ ] Install tux04 and tux05
+* + [ ] Order storage and caddies
+* + [ ] See about network adapters and support
+* [ ] Tux01 and Tux02 disk space issues
+* [ ] connect 10Gbs to tux01(?) - needs to be a new IP
* [ ] VPN access and FoUT
-* [ ] DMZ plan
* [ ] Setup VM on Tux02
* [ ] Key 410H
* [ ] research.gov submit Postdoc plan
@@ -63,7 +68,6 @@ Later
* [ ] Check Adrian's compiler w. odgi
* [ ] Update mars (fallback machine) also for development
* [ ] Pluto tool with Zach & Efraim
-* [+] Introduce &disk space and mdstat monitor
* [+] run sheepdog as root: redis password error; introduce SHEEPDOG_CONF
* [ ] Fix issues:
=> https://genenetwork.org/show_trait?trait_id=10441&dataset=HSNIH-PalmerPublish slow mapping
@@ -72,9 +76,14 @@ Later
=> ../issues/genenetwork1/gn1-production-system-issues.gmi
* [ ] fix GN1 images linking to http://www.webqtl.org/array_images/S238-1F1-U74Av2.png
-## Done
+### Maybe never
+
+* [ ] DMZ plan
+
+### Done
* [X] Order drives and caddies tux01 & tux02 (with @haoc)
+* [X] Introduce &disk space and mdstat monitor
* [X] Machine room HDDs
* [X] NSF report with UTHSC
* [X] Write test for R/qtl, GEMMA and other mapping