diff options
Diffstat (limited to 'tasks/bonfacem.gmi')
| -rw-r--r-- | tasks/bonfacem.gmi | 26 |
1 files changed, 18 insertions, 8 deletions
diff --git a/tasks/bonfacem.gmi b/tasks/bonfacem.gmi index 5445eeb..5c65543 100644 --- a/tasks/bonfacem.gmi +++ b/tasks/bonfacem.gmi @@ -10,20 +10,25 @@ ### This week -* [ ] Describe Generif access for Rob in an email +* [ ] Describe Generif/wikidata access for Rob in an email with test account on CD +* 1. Send email to Rob +* 2. Work on production * [ ] Migrate fahamuai RAG to VPS and switch tokens to GGI OpenAI account -* 1. running AI server using (our) VPS and our tokens -* 2. read the code base -* 3. assess porting it to Guix (don't do any work) -* [ ] Add lmdb output hashes with index and export LMDB_DATA_DIRECTORY -* [ ] Share small database with @pjotrp and @felixl +* 1. Running AI server using (our) VPS and our tokens +* 2. Read the code base +* 3. Try ingestion and prompt (REST API) +* 4. Backup state from production Elixir +* 5. Assess porting it to Guix (don't do any work) - minimum version Elixir +* [ ] xapian search, add dataset size keys, as well as GN accession id, trait id, and date/year +* - Improve xapian markdown docs to show all used fields/keys with examples +* - genewiki search (link in table? check with Rob) +* - base line with GN1 search - add tests +* [ ] With Alex get rqtl2 demo going in CD (for BXD) ### Later * [ ] Sample/individual/strain/genometype counts for PublishData only - ProbeSetData? https://github.com/genenetwork/genenetwork2/blob/testing/scripts/sample_count.py - mirror in RDF and use global search * - search for all traits that have more than X samples -* [ ] xapian search, add dataset size keys, as well as GN accession id, trait id, and date -* - Improve xapian markdown docs to show all used fields/keys with examples * [+] Use aider - give a presentation in the coming weeks * [ ] Add case attributes to RDF and share with Felix (depends on @felixl) @@ -64,3 +69,8 @@ Currently closed issues are: * [X] Indexing generif data / Improve Local Search * [X] lmdb publishdata output and share with Pjotr and Johannes + +## Done + +* [X] Add lmdb output hashes with index and export LMDB_DATA_DIRECTORY +* [X] Share small database with @pjotrp and @felixl |