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Diffstat (limited to 'issues')
| -rw-r--r-- | issues/add-to-collection-error.gmi | 39 |
1 files changed, 39 insertions, 0 deletions
diff --git a/issues/add-to-collection-error.gmi b/issues/add-to-collection-error.gmi new file mode 100644 index 0000000..e131eb2 --- /dev/null +++ b/issues/add-to-collection-error.gmi @@ -0,0 +1,39 @@ +# Add to Collection Error + +## Tags + +* assigned: fredm, zachs +* priority: urgent +* type: bug +* status: open +* keywords: collections + +## Description + +Go to the following correlation results: + +=> https://genenetwork.org/corr_compute?job_id=9922450b-3d68-40e3-bfa2-33e0056e8cca + +* Click the "More Options" button +* Filter the 500 entries by r>0, r<1, mean>3 and mean<100. +* Click the "Select Traits" button to activate your filter. This leaves only 73 entries. +* Select all of traits except the two in chromosome 16 which means 71 entries were selected. +* Click "+ Add" button to create new collection +* A new window opens and the error message "414 Request-URI Too Large" shows up + +This issue is also reproducible on https://cd.genenetwork.org + +### Generating Somewhat Similar Correlation Results + +There is a chance the link above might eventually expire. If that happens, you can regenerate the same correlation results with the following results: + +* Go to https://genenetwork.org/show_trait?trait_id=ENSG00000169344&dataset=GTEXv8_Kidn_tpm_0220 +* Open the "Calculate Correlations" accordion +* Set Method = "sample r" +* Set Database = "GTEXv8 Human Kidney-Cortex RNA-Seq (Feb20) TPM log2" +* Set "Limit to" = 500 +* Set Samples = GTEx_v8 +* Set Type = Pearson +* Set "Location Type" = "Gene" +* Click "Compute" +* Continue with the steps in the section above |