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Diffstat (limited to 'issues')
| -rw-r--r-- | issues/TempDataSet-object-has-no-attribute.gmi | 50 |
1 files changed, 50 insertions, 0 deletions
diff --git a/issues/TempDataSet-object-has-no-attribute.gmi b/issues/TempDataSet-object-has-no-attribute.gmi new file mode 100644 index 0000000..ce2459b --- /dev/null +++ b/issues/TempDataSet-object-has-no-attribute.gmi @@ -0,0 +1,50 @@ +# 'TempDataSet' object has no attribute 'query_for_group' (error) + +## Tags + +* assigned: zsloan, bonfacem +* priority: high +* type: bug +* status: unclear +* keywords: TempDataSet, from github + +## Description + +=> https://github.com/genenetwork/genenetwork2/issues/592 From GitHub + +After successful entry of new BXD trait data (both my own data and the example BXD set from the website), I tried to correlate the trait with the BXD phenotypes, by clicking the correlate button. This produced the error below: + +GeneNetwork tux01:gene:2.11-rc2-staging-427071fc7 http://www.genenetwork.org/corr_compute (12:29PM UTC Jul 16, 2021) +'TempDataSet' object has no attribute 'query_for_group' (error) +File "/export/local/home/gn2/production/gene/wqflask/base/data_set.py", line 334, in init +dataset.query_for_group) + + + + +Hi Rob and Zachary, + +Thanks for getting back so quickly. There is no urgency for me. I managed +to upload the trait as a batch file in the old version of genenetwork. + +The trait data that I tried to upload and check on GN2 was the +median-lateral position of the representation of visual space on V1. It was +old data that we had, but never uploaded, because we were investigating a +specific cross for another location trait with an interesting QTL. Rob, +your email spiked my interest again. I'll send a reply in the next few days. + +For testing purposes, the trait sequence was : X X X 0.3391 0.2467 0.6381 X +0.244 X 0.5926 0.3004 0.6346 0.3103 0.3372 X 0.4933 0.4008 0.404 X 0.4062 X +0.484 X X X 0.3358 0.3724 0.2757 X 0.2401 0.3712 0.2365 0.3328 X 0.3525 X X +0.3288 0.3354 X 0.4069 X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X +X X X X X X X X X X X X X X X X X X X X X +but also the sample from the website did not work for me. + + + + +@bonfacem might also be interested in this issue |