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Diffstat (limited to 'issues')
-rw-r--r-- | issues/genenetwork1/gn1-annotation-page-is-broken.gmi | 58 |
1 files changed, 58 insertions, 0 deletions
diff --git a/issues/genenetwork1/gn1-annotation-page-is-broken.gmi b/issues/genenetwork1/gn1-annotation-page-is-broken.gmi index 0d96a57..dcc226a 100644 --- a/issues/genenetwork1/gn1-annotation-page-is-broken.gmi +++ b/issues/genenetwork1/gn1-annotation-page-is-broken.gmi @@ -30,3 +30,61 @@ Lily runs a PHP from 2006(!) PHP 5.1.6 (cli) (built: Mar 18 2014 20:48:55) Copyright (c) 1997-2006 The PHP Group Zend Engine v2.1.0, Copyright (c) 1998-2006 Zend Technologies + +In guix-bioinformatics we have + +``` +php 5.6.40 out /home/gn1/guix-bioinformatics/gn/packages/php.scm:14:2 +``` + +Even if this page is for windows, it is the best description of using PHP: + +=> https://www.thesitewizard.com/php/install-php-5-apache-windows.shtml + +On lily: + +``` +AddType application/x-httpd-php .htm .html +``` + +And Apache: + +``` +[root@lily conf]# /usr/sbin/httpd -V +Server version: Apache/2.2.3 +Server built: Sep 16 2014 11:05:09 +Server's Module Magic Number: 20051115:3 +Server loaded: APR 1.2.7, APR-Util 1.2.7 +Compiled using: APR 1.2.7, APR-Util 1.2.7 +Architecture: 64-bit +Server MPM: Prefork + threaded: no + forked: yes (variable process count) +Server compiled with.... + -D APACHE_MPM_DIR="server/mpm/prefork" + -D APR_HAS_SENDFILE + -D APR_HAS_MMAP + -D APR_HAVE_IPV6 (IPv4-mapped addresses enabled) + -D APR_USE_SYSVSEM_SERIALIZE + -D APR_USE_PTHREAD_SERIALIZE + -D SINGLE_LISTEN_UNSERIALIZED_ACCEPT + -D APR_HAS_OTHER_CHILD + -D AP_HAVE_RELIABLE_PIPED_LOGS + -D DYNAMIC_MODULE_LIMIT=128 + -D HTTPD_ROOT="/etc/httpd" + -D SUEXEC_BIN="/usr/sbin/suexec" + -D DEFAULT_PIDLOG="run/httpd.pid" + -D DEFAULT_SCOREBOARD="logs/apache_runtime_status" + -D DEFAULT_LOCKFILE="logs/accept.lock" + -D DEFAULT_ERRORLOG="logs/error_log" + -D AP_TYPES_CONFIG_FILE="conf/mime.types" + -D SERVER_CONFIG_FILE="conf/httpd.conf" +``` + +This is similar what we have in Guix GN1. No mention of PHP in either. + +For simplicity we may switch to php-cgi + +=> https://stackoverflow.com/questions/28823252/installing-php-5-3-29-from-sources-on-ubuntu-14-with-apache-2-module + +=> https://www.bobulous.org.uk/coding/apache-php-cgi.html |