diff options
Diffstat (limited to 'issues/mgamma/mgamma-convert.gmi')
| -rw-r--r-- | issues/mgamma/mgamma-convert.gmi | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/issues/mgamma/mgamma-convert.gmi b/issues/mgamma/mgamma-convert.gmi new file mode 100644 index 0000000..d0ece51 --- /dev/null +++ b/issues/mgamma/mgamma-convert.gmi @@ -0,0 +1,18 @@ +# MGAMMA Convert + +MGamma can convert between different formats. + +# Tags + +* assigned: pjotrp, artyom +* type: feature +* priority: high + +# Tasks + +* [ ] Store genotypes as floats instead of doubles in lmdb +* [ ] Add annotations to genotype lmdb format - probably as the first named columns +* [ ] Provide a metadata header in JSON that tracks such info and a version +* [ ] Convert genotypes from strings using Rqtl2 CSV and metadata-JSON version of the control format, see + +=> https://kbroman.org/qtl2/assets/vignettes/input_files.html |