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Diffstat (limited to 'issues/genenetwork2/gn-libs-update.gmi')
| -rw-r--r-- | issues/genenetwork2/gn-libs-update.gmi | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/issues/genenetwork2/gn-libs-update.gmi b/issues/genenetwork2/gn-libs-update.gmi new file mode 100644 index 0000000..efb9c19 --- /dev/null +++ b/issues/genenetwork2/gn-libs-update.gmi @@ -0,0 +1,38 @@ +# Update gn-libs in CD container + +* assigned: bonfacem +* priority: high +* status: to-do +* deadline: <2026-01-07 Wed> + +## Description + +GN2 tests fail: + +``` +==================================== ERRORS ==================================== +____________ ERROR collecting gn2/tests/unit/base/test_data_set.py _____________ +ImportError while importing test module '/var/lib/laminar/run/genenetwork2/2358/genenetwork2/gn2/tests/unit/base/test_data_set.py'. +Hint: make sure your test modules/packages have valid Python names. +Traceback: +gn2/tests/unit/base/test_data_set.py:8: in <module> + from gn2.wqflask import app +gn2/wqflask/__init__.py:45: in <module> + from gn_libs.logging import setup_logging, setup_modules_logging +E ModuleNotFoundError: No module named 'gn_libs.logging' +______________ ERROR collecting gn2/tests/unit/base/test_trait.py ______________ +ImportError while importing test module '/var/lib/laminar/run/genenetwork2/2358/genenetwork2/gn2/tests/unit/base/test_trait.py'. +Hint: make sure your test modules/packages have valid Python names. +Traceback: +gn2/tests/unit/base/test_trait.py:6: in <module> + from gn2.base.trait import GeneralTrait +gn2/base/trait.py:3: in <module> + from gn2.wqflask import app +gn2/wqflask/__init__.py:45: in <module> + from gn_libs.logging import setup_logging, setup_modules_logging +E ModuleNotFoundError: No module named 'gn_libs.logging' +``` + +Note that a "gn-guile" definition in gn-machines has been added to gn-machines. + +* closed |
