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| -rw-r--r-- | issues/add-homology-track.gmi | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/issues/add-homology-track.gmi b/issues/add-homology-track.gmi new file mode 100644 index 0000000..dc71fb2 --- /dev/null +++ b/issues/add-homology-track.gmi @@ -0,0 +1,18 @@ +# Add track for showing which regions in mouse/rat correspond to human regions to the mapping figure + +# Tags + +* assigned: zsloan +* priority: medium +* type: feature-request +* status: open, in progress +* keywords: mapping + +# Description + +The idea is to add a new track to mouse/rat mapping figures that provides links to the corresponding region for humans in the UCSC Genome Browser. + +This can be done using these UCSC chain files. Links to the files and an explanation about their format are below: +- Help file: https://genome.ucsc.edu/goldenPath/help/chain.html +- Mouse reference: http://hgdownload.cse.ucsc.edu/goldenpath/mm10/liftOver/ +- Human reference: http://hgdownload.cse.ucsc.edu/goldenpath/hg38/liftOver/ |