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-rw-r--r--tasks/pjotrp.gmi2
-rw-r--r--topics/CTC/2023/gn-workshop-memphis.gmi8
-rw-r--r--topics/machines.gmi49
3 files changed, 38 insertions, 21 deletions
diff --git a/tasks/pjotrp.gmi b/tasks/pjotrp.gmi
index 1f15b8d..c99bf6e 100644
--- a/tasks/pjotrp.gmi
+++ b/tasks/pjotrp.gmi
@@ -47,7 +47,9 @@ Later
* [ ] Improve search for significant and suggestive hits
* [+] DOI support GN (Barcelona)
* [ ] Cito support (Barcelona)
+* [ ] Include dominance matrix results in gemma (gene expression and transcript isophorms)
* [ ] UCSC browser and big wig files
+* [ ] Jbrowse2 browser
### Ongoing tasks
diff --git a/topics/CTC/2023/gn-workshop-memphis.gmi b/topics/CTC/2023/gn-workshop-memphis.gmi
index 824146e..18c366b 100644
--- a/topics/CTC/2023/gn-workshop-memphis.gmi
+++ b/topics/CTC/2023/gn-workshop-memphis.gmi
@@ -2,9 +2,9 @@
Workshop at CTC-RG Memphis TN, Oct. 8, 2023 by Pjotr Prins, Shelby Solomon Darnell and Rob W. Williams. The idea is to have an topic intro followed by discussion
-
# Introduction(s)
+
# GN Overview
# GN AI
@@ -25,4 +25,10 @@ Workshop at CTC-RG Memphis TN, Oct. 8, 2023 by Pjotr Prins, Shelby Solomon Darne
# Encryption and privacy
+# Pangenomes
+
+
+
+# Leadership team
+
# Discussion
diff --git a/topics/machines.gmi b/topics/machines.gmi
index 188cfb1..01be5d2 100644
--- a/topics/machines.gmi
+++ b/topics/machines.gmi
@@ -2,31 +2,40 @@
```
- [X] lambda01 172.23.18.212 (7c:c2:55:11:9c:ac)
- + [ ] lambda01.uthsc.edu
- [ ] tux03i 172.23.17.181 (00:0a:f7:c1:00:8d) - 10 Gbs
- + [ ] DNS?
[X] tux03 128.169.5.101 (00:0a:f7:c1:00:8b) - 1 Gbs
- + [X] tax03.uthsc.edu
-- [ ] tux06 172.23.17.188 (14:23:f2:4e:29:10)
- + [ ] DNS
-- [ ] tux07 172.23.17.191 (14:23:f2:4e:7d:60)
- + [ ] DNS
-- [ ] tux08 172.23.17.186 (14:23:f2:4f:4e:b0)
- + [ ] DNS
-- [ ] tux09 172.23.17.182 (14:23:f2:4e:49:10)
- + [ ] DNS
-- [ ] space 128.169.5.175 (e4:3d:1a:80:6c:40)
- + [ ] DNS
+- [X] tux06 172.23.17.188 (14:23:f2:4e:29:10)
+- [X] tux07 172.23.17.191 (14:23:f2:4e:7d:60)
+- [X] tux08 172.23.17.186 (14:23:f2:4f:4e:b0)
+- [X] tux09 172.23.17.182 (14:23:f2:4e:49:10)
+- [X] space 128.169.5.175 (e4:3d:1a:80:6c:40)
```
## Out-of-band access
+c for console or control
+
```
-- [ ] lambda01-bmc 172.23.17.173
-- [ ] tux03-idrac 172.23.31.87 (D0:94:66:37:39:D5)
-- [ ] tux06-idrac 172.23.18.219 (14:23:f2:4e:29:10)
-- [ ] tux07-idrac 172.23.21.85 (C8:4B:D6:9B:8B:8E)
-- [ ] tux08-idrac 172.23.17.161 (C8:4B:D6:9B:8B:76)
-- [ ] tux09-idrac 172.23.17.187 (C8:4B:D6:9B:8D:14)
-- [ ] space-idrac 172.23.31.74 (CC:48:3A:13:DB:45)
+- [X] lambda01-c 172.23.17.173 (3c:ec:ef:aa:e5:50)
+- [X] tux01-c 172.23.31.85 (58:8A:5A:F9:3A:22)
+- [X] tux02-c 172.23.30.40 (58:8A:5A:F0:E6:E4)
+- [X] tux03-c 172.23.31.87 (D0:94:66:37:39:D5)
+- [X] tux04-c 172.23.18.222 (C8:4B:D6:97:03:7D)
+- [X] tux05-c 172.23.22.218 (C8:4B:D6:97:05:C3)
+- [X] tux06-c 172.23.18.219 (C8:4B:D6:9B:8B:3A)
+- [X] tux07-c 172.23.21.85 (C8:4B:D6:9B:8B:8E)
+- [X] tux08-c 172.23.17.161 (C8:4B:D6:9B:8B:76)
+- [X] tux09-c 172.23.17.187 (C8:4B:D6:9B:8D:14)
+- [X] space-c 172.23.31.74 (CC:48:3A:13:DB:45)
+- [X] octopus01-c 172.23.31.39 (2C:EA:7F:F2:9E:10)
+- [X] octopus02-c 172.23.31.37 (2C:EA:7F:F2:D8:74)
+- [X] octopus03-c 172.23.31.94 (2C:EA:7F:F2:CC:34)
+- [X] octopus04-c 172.23.31.38 (2C:EA:7F:F2:CF:F4)
+- [X] octopus05-c 172.23.31.95 (2C:EA:7F:F2:D2:7C)
+- [X] octopus06-c 172.23.31.36 (2C:EA:7F:F2:CF:A4)
+- [X] octopus07-c 172.23.31.65 (2C:EA:7F:F2:D8:14)
+- [X] octopus08-c 172.23.31.66 (2C:EA:7F:F2:CA:D4)
+- [X] octopus09-c 172.23.31.71 (2C:EA:7F:F2:D3:74)
+- [X] octopus10-c 172.23.31.33 (2C:EA:7F:F2:D2:6C)
+- [X] octopus11-c 172.23.31.64 (2C:EA:7F:F2:CE:84)
```