diff options
| -rw-r--r-- | issues/quality-control/qc-r-qtl2-bundles.gmi | 18 |
1 files changed, 9 insertions, 9 deletions
diff --git a/issues/quality-control/qc-r-qtl2-bundles.gmi b/issues/quality-control/qc-r-qtl2-bundles.gmi index 896831d..7a3007e 100644 --- a/issues/quality-control/qc-r-qtl2-bundles.gmi +++ b/issues/quality-control/qc-r-qtl2-bundles.gmi @@ -14,9 +14,9 @@ Currently (2024-02-02T05:41+03:00UTC), the code simply allows the upload of data The following "key" details the meanings of certain notations in this file: -* //[ ]//: not started -* //[-]//: partially done or in progress -* //[x]//: completed +* [ ]: not started +* [-]: partially done or in progress +* [x]: completed ### [-] Control File @@ -25,22 +25,22 @@ The following "key" details the meanings of certain notations in this file: * [-] Defaults for control data are auto-provided by code * [ ] Every file listed in control file MUST exist in the bundle -### [ ] //geno// File(s) +### [ ] geno File(s) * [ ] Every value existing in file is one of the genotype encodings in the control file -### [ ] //phenocovar// File(s) +### [ ] phenocovar File(s) -* [ ] At least one of the //phenocovar// files contains a **description** column +* [ ] At least one of the phenocovar files contains a "description" column * [ ] The description of every phenotype fits the rules[1] -### [ ] //pheno// File(s) +### [ ] pheno File(s) * [ ] Check for a minimal number of decimal places (three?) -### [ ] //phenose// File(s) +### [ ] phenose File(s) -This is a proposed addition for our specific use-case. If the data in the //pheno// file(s) was derived from averaging values, then the user could provide the corresponding "//standard error//" file(s). +This is a proposed addition for our specific use-case. If the data in the pheno file(s) was derived from averaging values, then the user could provide the corresponding "standard error" file(s). * [ ] Check for a minimal number of decimal places (six?) |