diff options
| -rw-r--r-- | tasks/fredm.gmi | 10 | ||||
| -rw-r--r-- | tasks/pjotrp.gmi | 33 |
2 files changed, 25 insertions, 18 deletions
diff --git a/tasks/fredm.gmi b/tasks/fredm.gmi index 743007a..6d73a78 100644 --- a/tasks/fredm.gmi +++ b/tasks/fredm.gmi @@ -17,8 +17,12 @@ You can refine the search by constraining the checks some more, e.g. to get high ## Priority -… +For gn-uploader -## Extra +=> https://issues.genenetwork.org/search?query=assigned%3Afrederick+keywords%3Agn-uploader&type=all + +For gn-auth -* Work on analysis of aging mice +=> https://issues.genenetwork.org/search?query=assigned%3Afrederick+keywords%3Agn-auth+is%3Aopen&type=all + +## Extra diff --git a/tasks/pjotrp.gmi b/tasks/pjotrp.gmi index 278323b..9c2f57f 100644 --- a/tasks/pjotrp.gmi +++ b/tasks/pjotrp.gmi @@ -14,20 +14,19 @@ The tasks here should probably be broken out into appropriately tagged issues, w # Current -## Mempang24 +## Systems -* [X] Invites -* [+] Payments -* [+] Rooms -* [+] Catering +- [X] mount NFS bacchus on octopus +- [ ] drop tux02 backups on balg01 +- [ ] reintroduce borg-borg ## Ongoing tasks (current/urgent) +* [ ] Precompute * [+] Set up stable GeneNetwork server instance with new hardware (see below) => /topics/systems/fire-up-genenetwork-system-container.gmi * [+] Julia as part of GN3 deployment => /topics/deploy/julia.gmi -* [+] Shelby's paper+application # Tasks @@ -43,18 +42,16 @@ Now (X=done +=WIP _=kickoff ?=?) * [+] Build leadership team * [+] gBAM -* [ ] Audit DB security * [ ] p-value global search -* [ ] Xapian search add tags, notmuch style (with @zachs) +* [+] Xapian search add tags, notmuch style (with @zachs) => ../issues/systems/octopus * [ ] Add R/qtl2 and multi-parent support with Karl (DO and Magic populations) -* [ ] Fix slow search on Mariadb? +* [+] Fix slow search on Mariadb? Moving to xapian * [.] GeneNetwork paper * + [ ] add FAIR statement * [ ] RISC-V trials -* [ ] Guix project server Longer term @@ -64,21 +61,26 @@ Longer term Later -* [ ] Remove ttf files GN2 +* [ ] Mempang25 + + [ ] Invites + + [ ] Payments + + [ ] Rooms + + [ ] Catering + +* [ ] Remove ttf files GN2 git repo * [+] DOI support GN -* [+] Tree of life w. Andrea * [ ] Hao's idea for counting cis-qtl * [ ] Improve search for significant and suggestive hits * [ ] Include dominance matrix results in gemma (gene expression and transcript isophorms) -* [ ] UCSC browser and big wig files -* [ ] Jbrowse2 browser +* [-] UCSC browser and big wig files (no longer applicable) +* [+] Jbrowse2 browser ### Set up stable server instance with new hardware * [ ] R/qtl2 with Karl * [ ] Set up opensmtpd as a service + [ ] Add package dependency - + [ ] Test on open port 25 + + [X] Test on open port 25 + [ ] Add public-inbox (Arun) => ./machine-room.gmi machine room @@ -92,6 +94,7 @@ Later ### Done +* [X] Guix project server * [X] Build junior team * [X] Complete Octopus setup with Erik, Andrea and Efraim - adding all machines * [X] Aging grant application w. Rob (fall) |