diff options
| -rw-r--r-- | tasks/pjotrp.gmi | 26 |
1 files changed, 14 insertions, 12 deletions
diff --git a/tasks/pjotrp.gmi b/tasks/pjotrp.gmi index 69fbdfb..4ffc7a6 100644 --- a/tasks/pjotrp.gmi +++ b/tasks/pjotrp.gmi @@ -18,14 +18,16 @@ The tasks here should probably be broken out into appropriately tagged issues, w Now -* [ ] Set up stable GeneNetwork server instance with new hardware (see below) -* [ ] Work on REST API -* [ ] GN4MSK rebranding - see issue -* [ ] Fix slow search on Mariadb +* [+] Set up stable GeneNetwork server instance with new hardware (see below) +* [+] Work on REST API +* [+] GN4MSK rebranding - see issue +* [+] Build leadership team +* [ ] Build GN consortium +* [ ] Add R/qtl2 and multi-parent support with Karl (DO and Magic populations) +* [ ] Fix slow search on Mariadb? * [ ] Drive for stability of GN tools (particularly GEMMA OOMP) * [ ] GEMMA batch run and precompute * [ ] GEMMA/bulklmm speedups -* [ ] Add R/qtl2 and multi-parent support with Karl * [ ] Support pluto notebooks with Efraim * [ ] Aging grant application w. Rob (August) * [+] Shelby's application (fall) @@ -36,7 +38,7 @@ Now Later -* [.] Tree of life w. Andrea +* [+] Tree of life w. Andrea * [+] Machine room security and access for bonz, fred, shelby, others... * [ ] Hao's idea for counting cis-qtl * [ ] Improve search for significant and suggestive hits @@ -48,24 +50,19 @@ Later ### Set up stable server instance with new hardware * [+] Create bootable Debian drive that uses ttyS0 -* [ ] Pluto with Efraim +* [+] Pluto with Efraim * [ ] R/qtl2 with Karl * [ ] Set up opensmtpd as a service + [ ] Add package dependency + [ ] Test on open port 25 + [ ] Add public-inbox -* [ ] Test new caddy and drives -* [ ] Set up cgit as a service => ./machine-room.gmi machine room -* [X] Fix mariadb index search - need to upgrade mariadb to convert final utf8mb4, see - => ../issues/slow-sql-query-for-xapian-indexing.gmi * [+] move backup dirs on tux01 to a larger partition (from export3 to export2) * [ ] Frontend for GN4MSK * [.] Check Tony's list and improve search for SNPs and Hs * [ ] GeneNetwork consortium (paper & CTC) -* [ ] Key 410H * [ ] research.gov submit Postdoc plan * [+] Complete vcflib work in Zig and release * [ ] Fix issues: @@ -76,3 +73,8 @@ Later * [ ] fix GN1 images linking to http://www.webqtl.org/array_images/S238-1F1-U74Av2.png ### Done + +* [X] Test new caddy and drives +* [X] Set up cgit as a service +* [X] Fix mariadb index search - need to upgrade mariadb to convert final utf8mb4, see + => ../issues/slow-sql-query-for-xapian-indexing.gmi |