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| -rw-r--r-- | issues/production-container-mechanical-rob-failure.gmi | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/issues/production-container-mechanical-rob-failure.gmi b/issues/production-container-mechanical-rob-failure.gmi index 8d8bc37..7839943 100644 --- a/issues/production-container-mechanical-rob-failure.gmi +++ b/issues/production-container-mechanical-rob-failure.gmi @@ -194,3 +194,25 @@ Version: '10.5.23-MariaDB-0+deb11u1-log' socket: '/run/mysqld/mysqld.sock' por 2025-02-20 7:50:17 5 [Warning] Access denied for user 'root'@'localhost' (using password: NO) 2025-02-20 7:50:17 0 [Note] InnoDB: Buffer pool(s) load completed at 250220 7:50:17 ``` + +A possible issue is the use of the environment variable SQL_URI at this point: + +=> https://github.com/genenetwork/genenetwork2/blob/testing/gn2/wqflask/correlation/rust_correlation.py#L34 + +which is requested + +=> https://github.com/genenetwork/genenetwork2/blob/testing/gn2/wqflask/correlation/rust_correlation.py#L7 from here. + +I tried setting an environment variable "SQL_URI" with the same value as the config and rebuilt the container. That did not fix the problem. + +Running the query directly in the default mysql client also fails with: + +``` +ERROR 2013 (HY000): Lost connection to MySQL server during query +``` + +Huh, so this was not a code problem. + +Configured database to allow upgrade of tables if necessary and restarted mariadbd. + +The problem still persists. |