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| -rw-r--r-- | issues/transform-genelist-to-rdf.gmi | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/issues/transform-genelist-to-rdf.gmi b/issues/transform-genelist-to-rdf.gmi new file mode 100644 index 0000000..3fac57c --- /dev/null +++ b/issues/transform-genelist-to-rdf.gmi @@ -0,0 +1,22 @@ +# Add GeneList to Metadata + +## Tags + +* assigned: bonfacem +* priority: high +* type: RDF +* keywords: virtuoso + +## Description: + +=> https://www.gene-list.com/about About GeneList + + +The GeneList table in GN fetches metadata about given Genes under Resource Links. + +Example: + +=> https://genenetwork.org/show_trait?trait_id=1460303_at&dataset=HC_M2_0606_P Trait Data and Analysis for 1460303_at + +When dumping data, it's unclear how resources (GeneMANIA, STRING, PANTHER, etc.) become links---they are manually constructed in GN's source code. This transformation is crucial when converting data to RDF. + |