diff options
| -rw-r--r-- | tasks/bonfacem.gmi | 39 |
1 files changed, 27 insertions, 12 deletions
diff --git a/tasks/bonfacem.gmi b/tasks/bonfacem.gmi index 7e78faf..03848f1 100644 --- a/tasks/bonfacem.gmi +++ b/tasks/bonfacem.gmi @@ -9,28 +9,37 @@ ## Tasks ### Note - -- Assess adding GeneRIF to LLM. -- Referrer headers -- a way of preventing bots beyond rate-limiting. +- GN-auth dashboard fixes. Follow up with Fred. +- Case-attributes used in co-variates. +- Encourage FahamuAI to be open. ### This week -* [ ] LMDB database. -* - Simplify (focus on small files). Don't over-rely on Numpy. -* - Try computations with R/qtl2 -* - Look at R LMDB libraries * [+] Case Attributes (Do a diagnostic and delegate) +* - Git blame. Add tests. * - Error when checking the history. * - Reach out to Zach. -* - Disable RIF editing in the UI +* - Disable diff in the UI. +* [ ] Distinct admin and dev user. +* [ ] Adapter to LMDB into a cross object. +* - Try computations with R/qtl2. +* - Look at R LMDB libraries. +* - Look at functions that read the files. +* - PJ: LMDB adapter in R and cross-type files. +* [ ] Send Arun an e-mail on how to go about upgrading shepherd. +* [ ] Dump all genotypes from production to LMDB. +* - PJ sync tux01 genotypes with tux02/04. * [+] Correlations hash. * - Add dataset count to RDF. * [ ] Spam + LLMs -* - RateLimiting for Rif Editing -* [+] Changes to Production + (Alex) - +* - RateLimiting for Rif Editing. +* - Honep Pot approach. +* [+] Help Alex with SSL certification container error. +* - Put the changes in the actual scm files. +* [X] Python Fahamu. +* [X] Memvid - brief look. ### Later - +* [ ] Dockerise GN container. For Harm. * [ ] Send emails when job fail. * [ ] Look at updating gn-auth/gn-libs to PYTHONPATH for gn2/3. * [ ] Sample/individual/strain/genometype counts for PublishData only - ProbeSetData? https://github.com/genenetwork/genenetwork2/blob/testing/scripts/sample_count.py - mirror in RDF and use global search @@ -116,3 +125,9 @@ Currently closed issues are: * [X] Finish container work * - View diffs in BXD: Edit case attributes throws an error. * [X] Check small db from: https://files.genenetwork.org/database/ +* [X] Changes to Production + (Alex) +* [X] File issue with syslog +* [X] LMDB database. +* - Simplify (focus on small files). Don't over-rely on Numpy. +* [X] Assess adding GeneRIF to LLM. +* [X] Referrer headers -- a way of preventing bots beyond rate-limiting. |