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| -rw-r--r-- | issues/add-genotype-files-to-rdf.gmi | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/issues/add-genotype-files-to-rdf.gmi b/issues/add-genotype-files-to-rdf.gmi new file mode 100644 index 0000000..85ac39c --- /dev/null +++ b/issues/add-genotype-files-to-rdf.gmi @@ -0,0 +1,14 @@ +# Add genotype file paths to RDF + +## Tags +* assigned: bonfacem +* type: bug +* status: open, in progress + +In Penguin2, genotype files are located in: /export/data/genenetwork/genotype_files/genotype. Each genotype files has an identifier to a dataset it refers to: + +``` +@name:B6D2 +``` + +Dump the above metadata in RDF. When we transition fully to an LMDB store, update the RDF node with a pointer to the LMDB store. |