diff options
| -rw-r--r-- | issues/automatically-find-broken-links-on-gn2.gmi | 9 | ||||
| -rw-r--r-- | issues/correlation-error.gmi | 8 | ||||
| -rw-r--r-- | issues/slow-correlations.gmi | 10 |
3 files changed, 25 insertions, 2 deletions
diff --git a/issues/automatically-find-broken-links-on-gn2.gmi b/issues/automatically-find-broken-links-on-gn2.gmi index e2662ec..87227ec 100644 --- a/issues/automatically-find-broken-links-on-gn2.gmi +++ b/issues/automatically-find-broken-links-on-gn2.gmi @@ -5,7 +5,7 @@ * assigned: zsloan, alex * type: bug * priority: medium -* status: in progress +* status: completed * keywords: GN1, GN2, broken links, from github ## Members @@ -36,3 +36,10 @@ raise request.routing_exception NotFound: 404 Not Found: The requested URL was not found on the server. If you entered the URL manually please check your spelling and try again. ``` + + +## update on finding broken links + +moved to complete the;gn2 CI runs on the background +for any background searchng for any broken link which +are then underlined and marked with red font \ No newline at end of file diff --git a/issues/correlation-error.gmi b/issues/correlation-error.gmi index ef6843f..e0aa825 100644 --- a/issues/correlation-error.gmi +++ b/issues/correlation-error.gmi @@ -4,7 +4,7 @@ * type: bug * priority: high -* status: unclear +* status: completed * keywords: correlations, from github, high priority ## Description @@ -23,3 +23,9 @@ GeneNetwork tux01:gene:2.11-rc2-production-283af77a7 http://www.genenetwork.org/ File "/export/local/home/gn2/production/gene/wqflask/wqflask/correlation/show_corr_results.py", line 473, in process_samples for sample in sample_names: ``` + + +## notes + +codebase for gn2 correlation had a rewrite +and this is no longer an issue \ No newline at end of file diff --git a/issues/slow-correlations.gmi b/issues/slow-correlations.gmi index 9f4c8c8..169eb95 100644 --- a/issues/slow-correlations.gmi +++ b/issues/slow-correlations.gmi @@ -110,3 +110,13 @@ time to compute. According to Rob, GN1 does not rely on a cache. Instead it is computing from a materialized view of the database that is intentionally designed for a fast web service. + + +## Update + +implementation of caching for huge datasets done.Moreover +this has also been implemented for metadata hence speeding +up the correlation immensely. + +Code for correlation has also undergone refactoring to optimise +the datastrcutures used \ No newline at end of file |