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| -rw-r--r-- | topics/R-qtl2-format-notes.gmi | 5 |
1 files changed, 5 insertions, 0 deletions
diff --git a/topics/R-qtl2-format-notes.gmi b/topics/R-qtl2-format-notes.gmi index 705e065..e0109b1 100644 --- a/topics/R-qtl2-format-notes.gmi +++ b/topics/R-qtl2-format-notes.gmi @@ -32,6 +32,11 @@ These seem to contain extra metadata for the phenotypes. The first column is the list of phenotype identifiers whereas the first column is a list of metadata headers (phenotype covariates). +As an example, +=> https://github.com/rqtl/qtl2data/blob/main/BXD/bxd_phenocovar.csv The phenocovar file for BXD mice + +We see here that this contains the individual identifier (id), and a description for each individual/sample. + # References => https://kbroman.org/qtl2/assets/vignettes/input_files.html |