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-rw-r--r--topics/R-qtl2-format-notes.gmi5
1 files changed, 5 insertions, 0 deletions
diff --git a/topics/R-qtl2-format-notes.gmi b/topics/R-qtl2-format-notes.gmi
index 705e065..e0109b1 100644
--- a/topics/R-qtl2-format-notes.gmi
+++ b/topics/R-qtl2-format-notes.gmi
@@ -32,6 +32,11 @@ These seem to contain extra metadata for the phenotypes.
The first column is the list of phenotype identifiers whereas the first column is a list of metadata headers (phenotype covariates).
+As an example,
+=> https://github.com/rqtl/qtl2data/blob/main/BXD/bxd_phenocovar.csv The phenocovar file for BXD mice
+
+We see here that this contains the individual identifier (id), and a description for each individual/sample.
+
# References
=> https://kbroman.org/qtl2/assets/vignettes/input_files.html