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authorMuriithi Frederick Muriuki2021-07-19 10:41:57 +0300
committerMuriithi Frederick Muriuki2021-07-19 10:41:57 +0300
commitcf3a2eb544015271548094f5c19387eee41bd48e (patch)
treeb5263bbd7ac4724957d871f312435524c4144b4c /topics
parenta6e605dca3bf9c716b32ce26a8043f94e3fa280b (diff)
downloadgn-gemtext-cf3a2eb544015271548094f5c19387eee41bd48e.tar.gz
Respond to initial topic notes
- Respond to issue note, and link produced images
Diffstat (limited to 'topics')
-rw-r--r--topics/gn1-migration-to-gn2/clustering.gmi16
1 files changed, 16 insertions, 0 deletions
diff --git a/topics/gn1-migration-to-gn2/clustering.gmi b/topics/gn1-migration-to-gn2/clustering.gmi
index c2c3ff4..bd60765 100644
--- a/topics/gn1-migration-to-gn2/clustering.gmi
+++ b/topics/gn1-migration-to-gn2/clustering.gmi
@@ -27,3 +27,19 @@ As a first step the computations should move to GN3 with proper regression/unit
- [ ] Create REST API endpoints
- [ ] Add regression/unit tests in GN3
- [ ] Add to GN2 web interface
+
+
+@pjotr I couldn't quite figure out what "CRTD mRNA", so I selected "Cartilage mRNA" , to try and produce a heat map, and I did get some results.
+
+The selected data was:
+
+- Species: Mouse (mm10)
+- Group: BXD Family
+- Type: Cartilage mRNA
+
+I got
+=> http://gn1-lily.genenetwork.org/image/Heatmap_8CJbN7Iy.png the initial heatmap
+and
+=> http://gn1-lily.genenetwork.org/image/Heatmap_syjdiq5z.png the 'Cluster Traits' heatmap
+
+is that anything like what I should expect? \ No newline at end of file