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| author | Pjotr Prins | 2023-03-23 10:34:19 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2023-03-23 10:34:19 +0100 |
| commit | 6610f72ba9bca6c5cf17e32fd97d3db87d29d9f5 (patch) | |
| tree | 46b89bd2a8c0073adaf981c466526400285db7de /topics/systems | |
| parent | 2fa5308f47fa71a8d517c141e340cefa64506bd6 (diff) | |
| download | gn-gemtext-6610f72ba9bca6c5cf17e32fd97d3db87d29d9f5.tar.gz | |
Wrote out precompute qtlreaper scores
Diffstat (limited to 'topics/systems')
| -rw-r--r-- | topics/systems/mariadb/precompute-mapping-input-data.gmi | 6 |
1 files changed, 3 insertions, 3 deletions
diff --git a/topics/systems/mariadb/precompute-mapping-input-data.gmi b/topics/systems/mariadb/precompute-mapping-input-data.gmi index da46bf7..77cfdd2 100644 --- a/topics/systems/mariadb/precompute-mapping-input-data.gmi +++ b/topics/systems/mariadb/precompute-mapping-input-data.gmi @@ -106,8 +106,8 @@ From this exercise we can conclude: * Existing precomputed values are by linear regression (old QTLreaper) * Only one highest score is stored * Every time the script is run *all* datasets are recomputed -* The _old valuse in the table are not touched by the script +* The '_old' named values in the table are not touched by the script * h2 and mean are not updated -* No significance score is computed +* No significance score is computed (needs permutations) -Rob voiced a wish to retain all scores (at least above 1.0). +Rob voiced a wish to retain all scores (at least those above 1.0). This is not feasible in mariadb, but we can retain GEMMA output if stored efficiently. |