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authorPjotr Prins2021-12-28 15:33:07 +0100
committerPjotr Prins2021-12-28 15:33:07 +0100
commit8527cfb6db5acb2392d36eb0e866a7cbca6ea3b5 (patch)
treebfbe9cc249f22b18ddc499a67fcaac3389439149 /topics/systems/mariadb/move-to-innodb.gmi
parent5bf33d5f8e808949e9bfa06fce2cb280a3f5a418 (diff)
downloadgn-gemtext-8527cfb6db5acb2392d36eb0e866a7cbca6ea3b5.tar.gz
mariadb to innodb notes
Diffstat (limited to 'topics/systems/mariadb/move-to-innodb.gmi')
-rw-r--r--topics/systems/mariadb/move-to-innodb.gmi29
1 files changed, 28 insertions, 1 deletions
diff --git a/topics/systems/mariadb/move-to-innodb.gmi b/topics/systems/mariadb/move-to-innodb.gmi
index 3462cf9..498228b 100644
--- a/topics/systems/mariadb/move-to-innodb.gmi
+++ b/topics/systems/mariadb/move-to-innodb.gmi
@@ -137,6 +137,9 @@ so, instead, I exported the CSV from
=> http://genenetwork.org/show_trait?trait_id=1427571_at&dataset=HC_M2_0606_P
+It took the server 2.02924s seconds to process this page.
+It took your browser 1.577 second(s) to render this page.
+
This is our test 'setup'.
## Backup and convert table
@@ -218,22 +221,46 @@ Unfortunately we can't swith to 4k page tables because we have existing tables.
```
MariaDB [db_webqtl]> ALTER TABLE ProbeSetSE ENGINE = InnoDB;
+Query OK, 688744613 rows affected (1 hour 51 min 36.273 sec)
+Records: 688744613 Duplicates: 0 Warnings: 0
```
+2 hours for a lousy table conversion!
+
The new file sizes are:
+```
+-rw-rw---- 1 mysql mysql 1.5K Dec 28 11:33 ProbeSetSE.frm
+-rw-rw---- 1 mysql mysql 51G Dec 28 13:25 ProbeSetSE.ibd
+```
+
+So the has tripled (including a new index) and during conversion it has both the old and the new on disk. I'll need to make space for this baby.
## Run tests again
+What about performance?
+
```
MariaDB [db_webqtl]> select count(*) from ProbeSetSE where strainid<20 and error<0.10;
++----------+
+| count(*) |
++----------+
+| 61625074 |
++----------+
+1 row in set (3 min 22.958 sec)
```
+Whoah. 3 times slower - which makes sense if you know the physical size of the data.
+
Again I exported the CSV from
=> http://genenetwork.org/show_trait?trait_id=1427571_at&dataset=HC_M2_0606_P
-and it shows the ...
+It took the server 1.46351s seconds to process this page.
+It took your browser 2.119 second(s) to render this page
+
+and it shows practically the same results.
+
## Notes captured from Trello: