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author | Pjotr Prins | 2023-12-03 09:42:57 -0600 |
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committer | Pjotr Prins | 2023-12-03 09:42:57 -0600 |
commit | f63f9df201c3ae57ad8b52cf5127995c82944be7 (patch) | |
tree | 00731e4b2e5b0fd4434a8b9b308703ded915df22 /topics/pudb/profiling_python_code.gmi | |
parent | fe2d644507548dcbaaf8d675d2e5c96795101d70 (diff) | |
download | gn-gemtext-f63f9df201c3ae57ad8b52cf5127995c82944be7.tar.gz |
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diff --git a/topics/pudb/profiling_python_code.gmi b/topics/pudb/profiling_python_code.gmi new file mode 100644 index 0000000..9052364 --- /dev/null +++ b/topics/pudb/profiling_python_code.gmi @@ -0,0 +1,28 @@ +# Profiling Python code + +As part of improving the system, there is need to identify and fix/improve the performance bottlenecks in the code. This document details examples of how one would run various profilers, for both GeneNetwork2 and GeneNetwork3 + +## GeneNetwork3 + +### cProfile + +Syntax: + +* env [various-env-vars] python3 -m cProfile the-script.py + +where + +* `[various-env-vars]` is a number of environment variables that might be needed for the running of the script, e.g. `SQL_URI` which is used to define how to connect to the database. +* `the-script.py` is the name of the python script to be run under the profiler + +The output can be redirected, e.g. + +* env [various-env-vars] python3 -m cProfile the-script.py 2>error.log 1>performance.log + +which should help will separating errors from the performance data, for easier analysis + + +## Tags + +* type: documentation +* keywords: profiling, python |