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| author | Pjotr Prins | 2024-02-12 16:47:37 +0100 |
|---|---|---|
| committer | Pjotr Prins | 2024-02-12 16:47:44 +0100 |
| commit | 334f8708c60dfc7631cbfbf3a1a9d365b1e387aa (patch) | |
| tree | f43b186fb5368f383aa8e5b801a7c5d249b683a6 /topics/hpc/octopus | |
| parent | 0fd47d887c82070892097f22a21825fdd0704256 (diff) | |
| download | gn-gemtext-334f8708c60dfc7631cbfbf3a1a9d365b1e387aa.tar.gz | |
Add sbatch example
Diffstat (limited to 'topics/hpc/octopus')
| -rw-r--r-- | topics/hpc/octopus/slurm-user-guide.gmi | 5 |
1 files changed, 3 insertions, 2 deletions
diff --git a/topics/hpc/octopus/slurm-user-guide.gmi b/topics/hpc/octopus/slurm-user-guide.gmi index feda19f..f7ea6d4 100644 --- a/topics/hpc/octopus/slurm-user-guide.gmi +++ b/topics/hpc/octopus/slurm-user-guide.gmi @@ -16,6 +16,7 @@ sinfo tells you about the slurm nodes: ``` sinfo -i +sinfo -R # show node state ``` squeue gives info about the job queue @@ -30,7 +31,7 @@ sbatch allows you to submit a batch job sbatch ``` -To get a shell prompt on one of the nodes +To get a shell prompt on one of the nodes (useful for testing your environment) ``` srun -N 1 --mem=32G --pty /bin/bash @@ -47,4 +48,4 @@ An example of using R with guix is described here: => ../../hpc/guix/R -If you choose, you can still use conda, brew, spack, Python virtualenv, and what not. Userland tools will work, even Docker or singularity may work. +If you choose, you can still use conda, brew, spack, Python virtualenv, and what not. Userland tools will work. Even Docker or singularity may work as they work from Guix. |