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| author | Muriithi Frederick Muriuki | 2021-07-19 10:41:57 +0300 |
|---|---|---|
| committer | Muriithi Frederick Muriuki | 2021-07-19 10:41:57 +0300 |
| commit | cf3a2eb544015271548094f5c19387eee41bd48e (patch) | |
| tree | b5263bbd7ac4724957d871f312435524c4144b4c /topics/gn1-migration-to-gn2 | |
| parent | a6e605dca3bf9c716b32ce26a8043f94e3fa280b (diff) | |
| download | gn-gemtext-cf3a2eb544015271548094f5c19387eee41bd48e.tar.gz | |
Respond to initial topic notes
- Respond to issue note, and link produced images
Diffstat (limited to 'topics/gn1-migration-to-gn2')
| -rw-r--r-- | topics/gn1-migration-to-gn2/clustering.gmi | 16 |
1 files changed, 16 insertions, 0 deletions
diff --git a/topics/gn1-migration-to-gn2/clustering.gmi b/topics/gn1-migration-to-gn2/clustering.gmi index c2c3ff4..bd60765 100644 --- a/topics/gn1-migration-to-gn2/clustering.gmi +++ b/topics/gn1-migration-to-gn2/clustering.gmi @@ -27,3 +27,19 @@ As a first step the computations should move to GN3 with proper regression/unit - [ ] Create REST API endpoints - [ ] Add regression/unit tests in GN3 - [ ] Add to GN2 web interface + + +@pjotr I couldn't quite figure out what "CRTD mRNA", so I selected "Cartilage mRNA" , to try and produce a heat map, and I did get some results. + +The selected data was: + +- Species: Mouse (mm10) +- Group: BXD Family +- Type: Cartilage mRNA + +I got +=> http://gn1-lily.genenetwork.org/image/Heatmap_8CJbN7Iy.png the initial heatmap +and +=> http://gn1-lily.genenetwork.org/image/Heatmap_syjdiq5z.png the 'Cluster Traits' heatmap + +is that anything like what I should expect?
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