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author | Pjotr Prins | 2023-06-21 10:09:49 +0200 |
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committer | Pjotr Prins | 2023-06-21 10:09:49 +0200 |
commit | b4bede9a424de85b6f0b3f9232486172e5baf96e (patch) | |
tree | 1a2a6bfaa2d9326b359d44e80fe41ea9f3b9bfc8 /topics/biohackathon/GNGSoC2023.gmi | |
parent | 6015a65b61f947d218adcc351ec844b68a726786 (diff) | |
download | gn-gemtext-b4bede9a424de85b6f0b3f9232486172e5baf96e.tar.gz |
GNSoC info page
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diff --git a/topics/biohackathon/GNGSoC2023.gmi b/topics/biohackathon/GNGSoC2023.gmi new file mode 100644 index 0000000..bf0bfb6 --- /dev/null +++ b/topics/biohackathon/GNGSoC2023.gmi @@ -0,0 +1,65 @@ +# GNGSoC 2023 + +GN Summer of Code + +## Introduction + +We are running a GN Summer of Code in small teams. + +* Runs July + August 2023 +* Weekly plenary where projects present progress - Thursday 9am EU, 10 am EAT. +* Projects should be (slightly) out of comfort zone +* Use gemtext documentation +* Option for publishing on progress by then end as a BLOG or BioHackrXiv + +## CI for guix-bioinformatics (guix pull) + +* lead: Arun +* team: Efraim, Pjotr, Sarthak + +Making GN deployment rock solid + +git repo genenetwork-machines, guix-bioinformatics + +## Nextgen databases + +lmdb+RDF + +* lead: Bonface +* team: Fred, Alex +* contact: Pjotr + +git repo genenetwork3 + +## LLMs & metadata (RDF) + +* lead: Shelby +* team: Priscilla +* contact: Bonface + +## API to access data from GN + +* lead: Rupert +* team: Flavia +* contacts: Bonface, Zach, Fred + +Documentation and adding endpoints + +git repo gn-docs & genenetwork3 & SPARQL + +=> https://github.com/genenetwork/gn-docs + +## Editing data + +* lead: Fred +* team: Arthur, Rupert, Zach +* contacts: Rob + +## Links + +* Matrix room is GNSoC2023 + +=> https://fosdem.org/2023/schedule/event/tissue/ Arun's talk on our issue tracker +=> https://github.com/genenetwork/gn-gemtext-threads Git repo on issues/tasks/topics + +For more info contact pjotr.public912 at thebird.nl |