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| author | Frederick Muriuki Muriithi | 2024-01-02 08:14:30 +0300 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-01-02 08:15:14 +0300 |
| commit | 048eca115d0aa3f7e3212519b3737361b5c95798 (patch) | |
| tree | 9762c7a9d357501f5b28d42ad6623bb3a66baf8d /topics/R-qtl2-format-notes.gmi | |
| parent | 6588db605fcfe41ada100188c2187ab9df402644 (diff) | |
| download | gn-gemtext-048eca115d0aa3f7e3212519b3737361b5c95798.tar.gz | |
Add example
Diffstat (limited to 'topics/R-qtl2-format-notes.gmi')
| -rw-r--r-- | topics/R-qtl2-format-notes.gmi | 5 |
1 files changed, 5 insertions, 0 deletions
diff --git a/topics/R-qtl2-format-notes.gmi b/topics/R-qtl2-format-notes.gmi index 705e065..e0109b1 100644 --- a/topics/R-qtl2-format-notes.gmi +++ b/topics/R-qtl2-format-notes.gmi @@ -32,6 +32,11 @@ These seem to contain extra metadata for the phenotypes. The first column is the list of phenotype identifiers whereas the first column is a list of metadata headers (phenotype covariates). +As an example, +=> https://github.com/rqtl/qtl2data/blob/main/BXD/bxd_phenocovar.csv The phenocovar file for BXD mice + +We see here that this contains the individual identifier (id), and a description for each individual/sample. + # References => https://kbroman.org/qtl2/assets/vignettes/input_files.html |