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authorPjotr Prins2023-09-21 10:42:19 -0500
committerPjotr Prins2023-09-21 10:42:19 -0500
commitc27b7ab07955e2382f4893446bd39e970c724519 (patch)
treee002ca67fac7921f8eeadd499f833e6a8633ae79 /tasks
parentb8a0f153ee2bf8ed48bd9417ea98a19a51a178b2 (diff)
downloadgn-gemtext-c27b7ab07955e2382f4893446bd39e970c724519.tar.gz
Update tasks
Diffstat (limited to 'tasks')
-rw-r--r--tasks/dana.gmi34
-rw-r--r--tasks/pjotrp.gmi15
2 files changed, 8 insertions, 41 deletions
diff --git a/tasks/dana.gmi b/tasks/dana.gmi
deleted file mode 100644
index 24749bb..0000000
--- a/tasks/dana.gmi
+++ /dev/null
@@ -1,34 +0,0 @@
-# Tasks for Dan
-
-## Tags
-
-* assigned: dana, pjotrp
-* priority: medium
-* type: system administration
-* status: closed
-* keywords: system administration, octopus, gateway, tux02, tux01
-
-## Tasks
-
-
-* [X] rabbit should access tux01
-* [X] mount new hard disks on tux02 and tux01 (with @haoc)
-* [X] move lily inside VPN
-* [X] move quadxeon inside VPN
-* [X] machine room access for Pjotr
-* [X] rabbit https and GN2 https
-
-=> ../issues/systems/decommission-machines.gmi
-
-## Info
-
-Tux02 and Penguin2 switched network IP addresses. The second is now only available through the VPN:
-
-=> tux02.genenetwork.org
-
-=> penguin2.genenetwork.org
-
-## Done
-
-* [X] move tux02 into position p2
-* [X] disconnect tux02 from 10Gbs
diff --git a/tasks/pjotrp.gmi b/tasks/pjotrp.gmi
index 384c37a..9749f75 100644
--- a/tasks/pjotrp.gmi
+++ b/tasks/pjotrp.gmi
@@ -16,25 +16,26 @@ The tasks here should probably be broken out into appropriately tagged issues, w
### Meta-tasks
-Now
+Now (X=done +=WIP)
-* [+] Set up stable GeneNetwork server instance with new hardware (see below)
-* [+] Work on REST API
* [+] Build leadership team
* [+] Build GN consortium
+* [+] gBAM
+
+* [+] Set up stable GeneNetwork server instance with new hardware (see below)
+* [+] Work on REST API
* [+] AraQTL and WormQTL2 embedding
+
* [ ] Add R/qtl2 and multi-parent support with Karl (DO and Magic populations)
* [ ] Fix slow search on Mariadb?
* [ ] Drive for stability of GN tools (particularly GEMMA OOMP)
* [ ] GEMMA batch run and precompute
* [ ] GEMMA/bulklmm speedups
-* [+] Support pluto notebooks with Efraim
* [+] Aging grant application w. Rob (fall)
* [+] Shelby's application (fall)
* [.] GeneNetwork paper
* + [ ] add FAIR statement
* [ ] RISC-V trials
-* [ ] gBAM
Later
@@ -43,13 +44,12 @@ Later
* [ ] Hao's idea for counting cis-qtl
* [ ] Improve search for significant and suggestive hits
* [+] DOI support GN (Barcelona)
-* [ ] Cito support
+* [ ] Cito support (Barcelona)
### Ongoing tasks
### Set up stable server instance with new hardware
-* [+] Create bootable Debian drive that uses ttyS0
* [ ] R/qtl2 with Karl
* [ ] Set up opensmtpd as a service
+ [ ] Add package dependency
@@ -72,6 +72,7 @@ Later
### Done
+* [X] Support pluto notebooks with Efraim
* [X] Frontend for GN4MSK
* [X] Test new caddy and drives
* [X] Set up cgit as a service