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authorMunyoki Kilyungi2025-01-27 10:38:55 +0300
committerMunyoki Kilyungi2025-01-27 10:38:55 +0300
commit7d4e8c6e24fe50883aec679d8ca6faa6f3c006cf (patch)
tree709c9b9c3b2a270166a33219d699944d32df9726 /tasks/programmer-team/meetings.gmi
parentb2120883654cc8cb407a59c31f4d03aa5f73226f (diff)
downloadgn-gemtext-7d4e8c6e24fe50883aec679d8ca6faa6f3c006cf.tar.gz
Update meeting notes.
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'tasks/programmer-team/meetings.gmi')
-rw-r--r--tasks/programmer-team/meetings.gmi40
1 files changed, 31 insertions, 9 deletions
diff --git a/tasks/programmer-team/meetings.gmi b/tasks/programmer-team/meetings.gmi
index 8bb150e..1692ef9 100644
--- a/tasks/programmer-team/meetings.gmi
+++ b/tasks/programmer-team/meetings.gmi
@@ -3,14 +3,15 @@
In this document we will track tasks based of our weekly meetings. This list sets the agenda
on progress for the next week's meeting.
-## @bonfacem
+## 27-01-2024
+### @bonfacem
* [ ] Report: OpenAI on Aider - use AI for programming - discuss with @alexm
=> https://issues.genenetwork.org/topics/ai/aider
-* [ ] Metadata: Provide list of case attributes for BXD to @flisso
-* [ ] Code UI: GeneRIF and GenWiki should work from the mapping page - encourage people to use
+* [-] Metadata: Provide list of case attributes for BXD to @flisso
+* [-] Code UI: GeneRIF and GenWiki should work from the mapping page - encourage people to use
- anyone logged in can edit
- If RIF does not exist point to GeneWiki
- If GeneWiki does not exist provide edit page
@@ -20,20 +21,41 @@ on progress for the next week's meeting.
- start exporting traits for Johannes (he will need to write a python reader)
* Later: Improve the work/dev container for @alexm
-## @flisso
+### @flisso
-* [ ] Write: Uploader protocol
+* [ ] Write: Uploader protocol. NOTES: Finished with C-elegans. Yet to test with other datasets.
* [ ] Script: Run Reaper
* [ ] Data: Case attributes - with @bonfacem
* [ ] Write: Create protocol to upload case attributes
-## @alexm
+### @alexm
-* [ ] Code: Rqtl2 match Rqtl1: match scan changes
-* [ ] Bug: Fix pair scan
+* [ ] Code: Rqtl2 match Rqtl1: match scan changes. Notes: PR out and added tests.
+* [ ] Bug: Fix pair scan. NOTES: Fixed it. But can't test it now since CD is down.
* Later: AI changes
-## Pjotr
+### Pjotr
* [ ] Code: Work on precompute with GEMMA (w. Jameson)
* [ ] Code: Take Bonface's trait files when they become available
+
+
+## 27-01-2024
+
+Last week's error with CD and production downtime:
+- [ level 1] Container: Error messages when data not loaded in Virtuoso, Indexing.
+- [ level 2] Sheepdog: Check services --- sheepdog. Health checkpoints.
+- [ level 3] User feedback. Escalate errors correctly to the users.
+
+
+### @Bonz
+* [ ] Troubleshoot CD.
+* [ ] Export files in lmdb. Yohannes read file in Python
+* [ ] Metadata: Provide list of case attributes for BXD to @flisso
+* [ ] Aider: See if it can generate some guile and python. Give an example.
+
+### @alexm
+* [ ] UI for R/Qtl2.
+
+### @flisso
+* [ ] Look at Fre'd Python code for the uploader and report on this.