diff options
| author | Frederick Muriuki Muriithi | 2024-06-26 08:32:28 -0500 |
|---|---|---|
| committer | Frederick Muriuki Muriithi | 2024-06-26 08:32:28 -0500 |
| commit | d376e98b271eea35e8bc493f283de21257f94ae6 (patch) | |
| tree | 42d8c011c165a1663c42a3ba11ca24366e83bc95 /issues | |
| parent | 4907e1011658712a0b58b03622c6892f608560bf (diff) | |
| download | gn-gemtext-d376e98b271eea35e8bc493f283de21257f94ae6.tar.gz | |
New Issue: gn-uploader - check against genotypes in the database.
Diffstat (limited to 'issues')
| -rw-r--r-- | issues/gn-uploader/check-genotypes-in-database-too.gmi | 17 |
1 files changed, 17 insertions, 0 deletions
diff --git a/issues/gn-uploader/check-genotypes-in-database-too.gmi b/issues/gn-uploader/check-genotypes-in-database-too.gmi new file mode 100644 index 0000000..ee2ac1d --- /dev/null +++ b/issues/gn-uploader/check-genotypes-in-database-too.gmi @@ -0,0 +1,17 @@ +# Check Genotypes in the Database for R/qtl2 Uploads + +## Tags + +* type: bug +* assigned: fredm +* priority: high +* status: open +* keywords: gn-uploader, uploader, upload, genotypes, geno + +## Description + +Currently, the uploader expects that a R/qtl2 bundle be self-contained, i.e. it contains all the genotypes and other data that fully describe the data in that bundle. + +This is unnecessary, in a lot of situations, seeing as Genenetwork might already have the appropriate genotypes already in its database. + +This issue tracks the implementation for the check of the genotypes against both the genotypes provided in the bundle, and those already in the database. |