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authorFrederick Muriuki Muriithi2022-03-22 14:33:54 +0300
committerFrederick Muriuki Muriithi2022-03-22 14:35:53 +0300
commit2f9fb7824d05f9cb3ec983d48f1034e3313affe3 (patch)
tree7b37b63e41371c9629ea34cecfc2964c6f2fd89c /issues
parent81d100f57519b4759fd99f0f3947774a31198ae8 (diff)
downloadgn-gemtext-2f9fb7824d05f9cb3ec983d48f1034e3313affe3.tar.gz
Add `Trait Names for Phenotypes` Issue from GitHub
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+# Fetch trait names for phenotypes
+
+## Tags
+
+* assigned:
+* status: pending
+* priority: unclear
+* type: feature-request, enhancement
+* keywords: phenotype, from github
+
+## Members
+
+* robw
+* rupertoverall
+
+## Description
+
+=> https://github.com/genenetwork/genenetwork2/issues/564 From GitHub
+
+The 'Fetch Trait Info' query returns detailed information for transcript expression traits, but not for traits from the 'Publish' database.
+
+### Describe the solution you'd like
+
+For example, downloading the data as CSV via the web interface includes the following header information:
+
+```
+
+Record ID,10620
+Symbol,WMZTrgtQuadTime
+Description,"Central nervous system, behavior, learning and memory: Morris water maze search-time preference, amount of time spent in the trained quadrant of the pool minus mean time in the alternative quadrants [seconds]"
+
+```
+
+Whereas via the API, only information on pre-computed QTL mapping is returned:
+
+```
+
+ additive id locus lrs
+10620 4.7790005 1382 rs32197605 9.39579775800466
+
+```
+
+It would be great to be able to access trait names and descriptions programatically as is already possible for transcript expression traits.